Paracoccus denitrificans: Pden_4425
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Entry
Pden_4425 CDS
T00440
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00500
Starch and sucrose metabolism
pde01100
Metabolic pathways
pde01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Pden_4425
Enzymes [BR:
pde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Pden_4425
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
ISOA1-3_C
DUF3459
Motif
Other DBs
NCBI-ProteinID:
ABL72489
UniProt:
A1BAE5
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All DBs
Position
2:complement(1628108..1630201)
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AA seq
697 aa
AA seq
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MTGLRIFEGRAEPLGATFDGDGVNFAVFSEHARRVTLCLFSPDGRTETHRLDLPERDGDV
WHGYVPGLRPGQLYGLRADGPYAPAEGHRFNYHKLLIDPYAKRLTRHPVWHDALMGYAVG
SPDADLSFDRRDSARFMPRSVVEDPSFAWGADQPPRRDIAETVIYEAHVKGLTQLHPDVP
HRGSFLGLASDPVLEHLQSLGVTALELLPAQAFLNDRFLLEKGLVNYWGYQTLGFFAPDP
RYLAKDQIAEFQHMVARMHAAGIEVIMDVVYNHTGEGNELGPTLSFRGLDNRSYYRLQEN
PRHYVDDTGTGNTLNVNHPMVLRMVMDSLRYWVEVMHVDGFRFDLCTALGRRVRGGFDRS
ASFFDAIRQDPVLTRVKLIAEPWDIGPGGYQVGGFPPPFLEWNDKYRDGIRRFWRGDARQ
VPELADRMAGSARQFDHSGRPATSSVNFLTAHDGFTLMDVVSYGEKHNAANGEQNRDGHS
ENFSDNMGVEGPSDDPAILDARARRRRNLLATLLLSQGTPMLLAGDELGNSQAGNNNAYC
QDNQIGWVQWDGADPAFLDFTRRLIAFRRAHPILRQKRFLHSRPRLTDGLPDLFWLRPDG
EEMTPADWGNPELRVLCAELRMAAGTPDYAQREEALFLVFNNGDPLEVVLPERPEGWRWR
LHLDTSRPDLAPHVVEGDRLAVDGQSVLAFDLERDRD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggctgcgtatcttcgagggccgggcggaaccgctgggcgccactttcgatggc
gatggcgtgaacttcgccgtgttttccgaacatgcgcggcgggtgacgctgtgcctgttc
tcgcccgacggccggaccgagacgcaccggctggacctgccggaacgcgacggcgatgtc
tggcacggctatgtccccggcctgcgccccggccagctttacgggctgcgcgccgatggt
ccctatgcgccggccgaggggcaccgcttcaattatcacaagctgctcatcgatccctat
gccaagcggctgacccggcatccggtctggcacgacgcgctgatgggctatgccgtcggc
tcgcccgacgccgatctcagcttcgaccgccgcgacagcgcgcgcttcatgccgcgctct
gtggtcgaggatccgtccttcgcctggggcgccgaccagccgccgcgccgcgacatcgcc
gagacggtgatctacgaggcccatgtcaagggcctgacccagctgcatcccgacgtgccc
catcgcggcagctttctgggcctcgcctcggacccggtcctggaacacctgcaatccctg
ggcgtcaccgcgctggagctgctgccggcgcaggccttcctgaacgaccgtttcctgctg
gaaaaggggttggtgaactattggggctaccagacgctgggctttttcgccccggacccg
cgctatctggccaaggatcagatcgccgagttccagcacatggtcgcccgcatgcacgct
gccgggatcgaggtcatcatggacgtggtctacaaccacaccggcgagggcaacgagctt
ggcccgacgctgtcctttcgcggcctcgacaaccgcagctactaccgcctgcaggaaaat
ccccgccattacgtcgatgacaccggcaccggcaacacgctgaacgtcaatcaccccatg
gtgctgcgcatggtcatggacagcctgcgctattgggtcgaggtgatgcatgtggacggt
ttccgcttcgatctttgcacggcgctggggcggcgggtgcgcggcggtttcgaccgcagc
gcctcgttcttcgatgcgatccggcaggacccggtgctgacgcgggtcaagctgatcgcc
gagccctgggacatcggacccggcggctatcaggtcgggggcttcccgccgcccttcctg
gagtggaacgacaagtatcgcgacggcatccgccgcttctggcgcggcgatgcgcggcag
gtgcccgagcttgccgaccgcatggccggctcggcccggcagttcgaccattccggccgg
cccgccacctcgtcggtgaacttcctgaccgcgcatgacggctttacgctgatggatgtg
gtcagctacggcgaaaagcacaacgccgccaatggggaacagaatcgcgacggccattcc
gagaatttctcggacaacatgggtgtcgaggggcccagcgacgatcccgccatcctcgac
gcccgcgcgcgccggcgccgcaacctgctggcgacgctgcttttgtcgcagggcacgccg
atgctgctggccggggacgagctgggcaattcgcaggccggcaacaacaacgcctattgc
caggacaaccagatcggctgggtgcagtgggacggcgccgatcctgcgtttctggacttt
acccgcaggctcatcgcctttcgccgcgcccatccgatcctgcggcagaaacgctttctg
cattcgcgcccgcgcctgaccgacgggctgcccgacctgttctggctgcgcccggacgga
gaggagatgaccccggccgactggggcaatcccgagctgcgcgtgctttgcgccgagctg
cgcatggccgccggcacccccgattatgcgcagcgcgaggaggcgctgttcctggtcttc
aacaacggcgacccgctggaggtggtgctgcccgaacgccccgagggctggcgctggcgg
ctgcacctggacaccagccgtcccgatctggccccgcatgtggtcgagggcgaccggctg
gcggtggacggccagtccgtcctcgccttcgatctggagcgcgaccgtgactga
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