Paracoccus denitrificans: Pden_4458
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Entry
Pden_4458 CDS
T00440
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
pde
Paracoccus denitrificans
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Pden_4458
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
HHH_3
Tex_N
S1
HHH_9
HHH_7
S1_RRP5
YqgF
T2SSK
RNase_II_C_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ABL72522
UniProt:
A1BAH8
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Position
2:complement(1669248..1671560)
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AA seq
770 aa
AA seq
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MPPVDATDRIARTIAAEISASPTQVAAASALLDGGATVPFVARYRKEVTGGLDDTQLRTL
SERLAYLRELEARRVSILESIKGQGKLTDELARAIAGAGTKATLEDIYLPFKPKRRTKAM
IARENGLEPLLRAIQENRAAEPEALAAGYLAEAVPDVKSALDGARDILVEELSENAALLG
RLREFMQAEAIISAKVVPGKEQVGAKFSDYFDQSEKWASIPAHRALAILRGAKEEVLTIE
IAPEPETGAARAEGIVASALGRLGDQPGDRWLRKVAGWCWRVRLSNTMYIDLLTELRARA
HAEAIRVFARNLKDLLLASPAGPRPTIGLDPGIRTGVKLAAVDGTGKLVETATLYPFPPR
SDLRGAEAALAAAIVKHGIELIAIGNGTASRETERFVAEVLKRLPEGVKQPVKVIVSEAG
ASVYSASELAAKEFPGLDVSLRGAVSIARRLQDPLAELVKVPPESIGVGQYQHDVDQRQL
ARTLEAVVEDAVNAVGVDLNTASAPLLAHVAGLGPSLAQNIVAWRDENGAFPSRAALKKV
GGLGPRAFEQCAGFLRIRDGKEPLDASSVHPEAYGVARRIVAACGRDIRQIMGDGAALKG
IRAEAFVDEHFGLPTIRDILSELEKPGRDPRPSFVTASFAEGVEAIGDLRPGMALEGTVT
NVAAFGAFVDIGVHQDGLVHISQLADRFVKDPNEVVKVGDVVKVRVTEVDVARKRIGLTM
RKDGGASARDAQKERGPKAQPARGPKSAAPAGKEQPGALGAALLNALRKN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgtggacgcaaccgaccgcattgcccgcaccatcgccgccgagatcagcgcc
agccccacccaggtcgctgcggcctcggccttgctggacgggggtgcgaccgtgcccttc
gtcgcgcgctatcgcaaggaggtgacgggcgggctggacgacacgcagctgcgcacgctg
tcggaacggctggcctatctgcgcgaactcgaggcgcggcgggtctcgatcctcgaatcg
atcaaggggcagggcaagctgaccgacgaactggcccgcgccatcgccggggccgggacc
aaggccacgctcgaggacatctacctgcccttcaagcccaagcgccgcaccaaggcgatg
atcgcccgggaaaacgggctggagccgctgttgcgtgccatccaggaaaaccgtgccgcc
gaacccgaggcgctggcggcgggctatctggccgaggcggtgccggacgtgaaatcggcg
ctggacggcgcgcgcgacatcctggtcgaggaactgtccgagaatgcggcgctgctgggc
cggctgcgcgaattcatgcaggccgaggcgatcatctcggccaaggtggtgccgggcaag
gagcaggtcggcgccaagttcagcgactatttcgaccagtccgagaaatgggcgagcatc
ccggcgcatcgcgcgctggcgatcctgcgcggcgccaaggaagaggtgctgaccatcgag
atcgcgcccgagccggaaaccggcgcggcgcgggccgagggcatcgtcgcctcggcgctg
ggacggctgggcgatcagccgggcgaccgctggctgcgcaaggtggcgggctggtgctgg
cgggtgcggctgtcgaacaccatgtatatcgacctgctgaccgagctgcgcgcgcgcgcc
catgccgaggcgatccgggttttcgcccgcaatctcaaggatctgctgctggcctcgccc
gccggcccgcgcccgaccatcgggctggaccccggcatccgcaccggggtcaagctggcg
gcggtggacggcaccggcaagctggtcgagacggcgacgctgtatccctttccgccgaga
tccgacctgcgcggggccgaggccgcgctggccgccgccatcgtcaagcacgggatcgag
ctgatcgccatcggcaacggcaccgccagccgcgagaccgagcgcttcgtggccgaggtg
ctcaagcgcctgcccgaaggcgtgaagcagcccgtgaaagtaatcgtcagcgaggccggc
gcctcggtctattccgcctcggaactggcggccaaggagtttcccggcctcgacgtgtcc
ttgcgcggcgcggtctccatcgcccggcgcctgcaggacccgctggccgaactggtcaag
gtgccgcccgaatcgatcggcgtcggccaataccagcacgacgtggaccagcgccaactg
gccaggacgctggaggcggtggtcgaggacgcggtgaacgcggtgggggtggacctgaac
accgcctcggcgcccttgctggcgcatgtcgcggggctgggtccgtcgctggcgcagaac
atcgttgcctggcgcgacgagaacggcgccttcccgtcgcgcgctgcgctgaagaaggtc
ggcggcctcggcccgcgcgccttcgagcaatgcgcgggcttcctgcgcatccgcgatggc
aaggagccgctggacgcctcctcggtccaccccgaggcttacggcgtcgcgcgcaggatc
gtcgccgcctgcggccgcgacatccgccagatcatgggcgacggcgcggcgctgaagggc
atccgcgcggaagccttcgtcgatgagcatttcggcctgcccaccatccgcgacatcctg
tccgaactggaaaagcccggccgcgacccgcgcccgagcttcgtcacggcaagcttcgcc
gagggggtcgaagcgatcggcgatctgcgtcccggcatggcgctggagggcacggtgacg
aatgtcgcggccttcggcgccttcgtcgatatcggcgtgcatcaggacgggctggtgcat
atcagccagcttgccgaccgtttcgtcaaggacccgaacgaggtggtgaaggtcggcgac
gtggtcaaggtgcgggtgaccgaggtggacgtggcgcgcaagcgcatcggcctgaccatg
cgcaaggacggcggcgcctcggcccgcgacgcgcagaaagagcgcggccccaaggcccag
ccggcacgcggcccgaaatccgccgcacccgctggaaaggagcagcccggcgcattgggc
gcggcgctgctgaacgcgctgcgaaagaactga
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