Planococcus dechangensis: H1Q58_01295
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Entry
H1Q58_01295 CDS
T07033
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pdec
Planococcus dechangensis
Pathway
pdec02020
Two-component system
pdec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pdec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H1Q58_01295
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H1Q58_01295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdec03021
]
H1Q58_01295
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pdec02035
]
H1Q58_01295
Transcription machinery [BR:
pdec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H1Q58_01295
Bacterial motility proteins [BR:
pdec02035
]
Flagellar system
Flagellar assembly proteins
Stator
H1Q58_01295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_5
CT_C_D
Rv2175c_wHTH
HTH_23
HTH_IclR
HTH_28
Sigma70_ECF
PriX
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QMT17693
UniProt:
A0A7D7MF53
LinkDB
All DBs
Position
234415..235173
Genome browser
AA seq
252 aa
AA seq
DB search
MGNQKLSNAELTQWGNWQQHRDQDAGDYLVAKYLPLVDYVIQRFLISLPKTVDKDEVRSY
AYEGLLDALDKFKPEKDWKFETYAAWRIKGAIIDGLRKSDWLPRSLRDKVKKIEKAYAEL
EQQKGESVSDQEVSAYLGMTQAELNRAVSEAALSAMLSMDVEQANMEDRLPRAVAGSPER
ELSGQLTKDALSKAIAKLPEKEKLTVSLCYFEEMKLTEIAEILGLSVSRVSQLHSKAMLR
LHAAMLSVHEHY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcagaaattgtcgaatgcagaactgacgcaatggggcaactggcagcaacat
agggaccaggacgccggtgattatttggtcgcgaaatatttgcccttggtggattatgtg
attcaacgctttctcatcagcctgccgaaaaccgtcgataaagatgaagtccgaagctac
gcctacgaaggcttgctggatgcccttgataaattcaagcccgaaaaagattggaagttt
gaaacttatgccgcgtggcgcatcaaaggggcgatcatcgatggacttcgaaaaagcgac
tggctgccgcgctcgctgcgggacaaggtcaagaaaatcgaaaaagcatacgccgaactc
gaacaacagaaaggcgagagcgtcagcgaccaggaagtcagcgcatatttgggcatgacc
caagctgagttgaatcgtgcagtgtcagaagctgctttatcggcgatgctatcgatggac
gttgagcaggcgaacatggaagatcgcttgccgcgagctgtcgccggttcgccggaacgc
gagctgtctgggcaattgacgaaagacgctttgtcgaaagctatcgccaagcttccggaa
aaagagaaattaacggtttccttatgctattttgaagagatgaagctgaccgaaatcgct
gaaattctcgggctcagcgtatcgagagtgtcgcaattgcattccaaggcgatgctccgg
ctgcatgcagcgatgttatcggtccatgaacattattaa
DBGET
integrated database retrieval system
