Planococcus dechangensis: H1Q58_06270
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Entry
H1Q58_06270 CDS
T07033
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pdec
Planococcus dechangensis
Brite
KEGG Orthology (KO) [BR:
pdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdec03009
]
H1Q58_06270
Enzymes [BR:
pdec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
H1Q58_06270
Ribosome biogenesis [BR:
pdec03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
H1Q58_06270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QMT18565
UniProt:
A0A7D7SIZ0
LinkDB
All DBs
Position
1248537..1249250
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AA seq
237 aa
AA seq
DB search
MRIDKLLSNSGFGSRKEVKILLKSKAVEVNGETVRDPKFHVDEKLDQVSVGGESVVYREF
IYLMMNKPPGVISATEDRFDETVIDLLSEEEQRFEPFPVGRLDKDTEGLLLITNDGKLAH
ELLSPKKHVDKTYYAKIDSPVTEEDAVAFKKGVVLDDGYETKPAQLRILRSGDESEIELT
ITEGKFHQVKRMFESVGKQVVFLKRLSMGPLSLDESLASGEYRELSEEELTTLKQRK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgataaattgctgtcgaattcagggttcggctcaagaaaagaagtgaagatc
ttactgaaatcaaaagcggtggaagtcaacggcgaaacggtccgtgaccctaaattccac
gtggacgaaaaattagatcaagtgtctgtcgggggcgaatcggtcgtttaccgggaattc
atctatttgatgatgaacaaaccgccaggcgtcatttcagcaacggaagaccgcttcgat
gaaaccgtcattgacttgctgtcagaagaagagcagcgtttcgagccgtttccggtcggg
cgccttgataaagatacagaagggttattgctgatcaccaatgatggcaaattggcccac
gagttgttgtcgccgaaaaagcatgtggataaaacttattatgcgaaaatcgatagcccg
gtaacagaggaagatgcagtggcattcaagaaaggtgtcgtacttgatgacgggtatgag
acgaagcccgcgcaactgcgcattttacgtagcggagatgaatccgaaatcgaattgacc
atcacagaaggcaagtttcaccaagtcaagcgcatgttcgaaagcgttggcaaacaagtg
gtgtttctaaagcgtttgtcgatgggtccgctatcgctcgatgaatcgcttgctagcgga
gaataccgcgaattgagtgaagaagaattaactacattaaaacaaagaaaatga
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