Planococcus dechangensis: H1Q58_07135
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Entry
H1Q58_07135 CDS
T07033
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pdec
Planococcus dechangensis
Pathway
pdec03410
Base excision repair
pdec03430
Mismatch repair
pdec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H1Q58_07135 (recJ)
03430 Mismatch repair
H1Q58_07135 (recJ)
03440 Homologous recombination
H1Q58_07135 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdec03400
]
H1Q58_07135 (recJ)
DNA repair and recombination proteins [BR:
pdec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H1Q58_07135 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H1Q58_07135 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H1Q58_07135 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QMT18725
UniProt:
A0A7D7SJ77
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Position
1426886..1429228
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AA seq
780 aa
AA seq
DB search
MIESKKRWQLTSPDEQAVQNLQQALSLSSVLAKILVTRGIDTVDKAEEFLSVELSGIHNP
FLMKDMDVAVARIQQAIEAEEKILVYGDYDADGVTSTTVMMTVLEDLGANVSFKIPNRFD
HGYGPNAELFKEAHAEGVNLIVTVDNGVSGIEPVRLANELGMDVIISDHHDIGDELPEAL
AIIHPRHPQGNYPFGELAGVGVAFKMAQALYGDIPEHLTELVAIGTIADLVPLHGENRLL
VKEGLRALQDSPMPAIAALADVAGVKQRDITEETIGFMFGPRINAIGRLQSADPAVRMFM
TDDPSEARSLADGLDVLNKERQAIVKAISEQAIEQVEARYGDQLPHVIIVAQEGWNPGVV
GIVASKLTEKFYRPSIVLSLDLANGKAKGSARSIEGFHLYNELAKNRDVLPHFGGHPMAA
GMTLAAADVDELRERLNEQAKRSLTAEDLVPVVSIDIPVSLDEVDTETIEGMRQLAPFGM
GFAKPKFYLQGVKVAGIRKIGASQAHLKMELAQNSSTLDAVGFGIGELGDQLTPDVKIDV
IGDLQINEWNGRKKPQLLVEDIRTDEWQLFDIRGIRQVSRWSKLIPTQNQVYVAFQQETE
AVFSSLLDGPIVSAQSLTEQGAVKDHLVLLDLPDSEEQLSSVLKQLKPKRVYAHFYAQES
QYFERIPDRDQFKWLFGFVKKRGSFDFKKNGDELSKHKGWSRETLFFMLQVFFELGFVTL
NNGITEIAQVPGKRDLSEAPAYQKRERQIALEQKLLYASYRDLKDWFDAQVSAKEEELWI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatccaaaaaaagatggcaactaacaagtccggatgaacaagcggtacaaaat
ttacagcaagcgctatccttgtcttctgtgttggcgaagattctcgtcacgcgcggaatc
gacacggtggacaaagctgaagaatttctatccgtcgaattatccggcatacataatccg
tttctaatgaaggatatggacgtcgccgtggcgcgtatccaacaagcgattgaagcggag
gagaaaattctggtttacggcgattacgatgccgatggcgtaacgagtacgactgtcatg
atgacggttctcgaggatttgggtgcgaacgtatcgtttaagatcccgaaccgttttgat
catggctacggcccgaatgccgagctgttcaaagaagctcacgctgaaggcgtcaacttg
atcgtcaccgtagacaatggcgtgtccggcatcgagccggtgcgtttggcaaacgaactt
gggatggacgttattatcagcgaccaccacgatatcggcgacgagctgccggaagcgctt
gcgatcatccatccaaggcatccacagggcaattaccccttcggcgaattggccggcgta
ggagtggcattcaagatggcgcaagcgctatatggcgacattccggaacatttgacggag
ttagtcgcgattggcaccattgctgatttggtgcctttgcacggtgaaaaccgacttctc
gtcaaagagggcctgcgggcattgcaggattcgccgatgcctgcgattgcagcgctcgcg
gatgttgcaggtgtcaagcaacgcgatattacggaagagacgatcggctttatgttcggc
ccgcgtatcaatgcgattggccgcctgcaatcagctgatccggcggtgcggatgttcatg
acggacgacccgtcagaagctcggtcgctcgcagacggcttagacgttttgaacaaggaa
cgccaagctatcgtcaaggcgatctctgagcaagcgattgaacaagtagaggcgcgttac
ggagatcaattgccgcacgtcatcatcgttgcacaagaaggctggaaccctggtgttgtc
ggcatcgtggcctcaaaattgactgagaaattttaccgcccatcgatcgtattgtcactt
gatttggcaaatggtaaagcgaaaggctcggcccgcagcatcgaaggttttcatctatac
aacgaacttgccaaaaaccgcgacgtcctgccgcattttggcggccatccgatggcagcg
ggcatgacgcttgcggcagcggatgttgatgaattgcgtgaacgcttgaatgaacaggca
aaacgttcattgacggctgaagatttggtgccggttgtgtcgatcgatattccagtctct
ttagatgaggtggatacggaaaccattgaaggcatgcgccaacttgcgccgtttggtatg
ggctttgctaagcccaaattttacttgcaaggcgttaaggtggcgggtattcgaaaaatc
ggggcaagccaagcgcatctcaaaatggagcttgcgcaaaacagctctacattggatgcg
gttggctttggcatcggtgaactcggcgatcaactgacgccggatgttaaaatcgatgtt
atcggcgacttgcagattaacgaatggaacggccgcaaaaaaccacagctcttggtagaa
gatatccgcacggacgaatggcaactattcgatatccgcggcatccgccaagtgagccgc
tggtccaagcttatcccaacgcaaaaccaggtttacgtcgcttttcaacaagagacagaa
gccgtattcagctcactactcgatgggccgatcgtttcagcacagtcactgactgaacaa
ggagctgtaaaagaccatctggtgttactggatttgccggattctgaagaacaattatcg
tctgtcctcaagcaattaaagccaaaacgagtttatgcgcatttttatgcgcaggaatct
caatactttgaacgcattccagaccgtgaccaatttaagtggctattcggtttcgtcaaa
aagcgcggcagcttcgatttcaaaaagaatggtgacgaactctccaaacacaaaggttgg
agccgggaaacattatttttcatgcttcaggtgttttttgaactcggttttgttacactt
aacaatggaattaccgagattgcacaggttccgggaaaacgtgatctgtcggaagcgcca
gcttatcaaaagcgcgagcggcaaattgctttagaacagaagctcttgtatgcatcctat
cgggatctaaaagactggtttgacgcccaagtgtcagccaaggaggaagaattatggatt
taa
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