Planococcus dechangensis: H1Q58_09870
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Entry
H1Q58_09870 CDS
T07033
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pdec
Planococcus dechangensis
Pathway
pdec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H1Q58_09870 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdec03019
]
H1Q58_09870 (pnp)
03016 Transfer RNA biogenesis [BR:
pdec03016
]
H1Q58_09870 (pnp)
Enzymes [BR:
pdec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H1Q58_09870 (pnp)
Messenger RNA biogenesis [BR:
pdec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H1Q58_09870 (pnp)
Transfer RNA biogenesis [BR:
pdec03016
]
Prokaryotic type
tRNA degradation factors
H1Q58_09870 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_RRP5
OB_RRP5_4th
S1_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QMT16285
UniProt:
A0A7D7SEV7
LinkDB
All DBs
Position
complement(1956231..1958339)
Genome browser
AA seq
702 aa
AA seq
DB search
MEQTKKTYSFDWAGRELKVEVGQLAKQANGAALIRYGDTAVLSTATASKSPKPLDFFPLT
VNYEERQYAVGKIPGGFIKREGRPSEKATLISRLIDRPLRPLFPDGFRNEVQVISMVMSV
DQDCPSEMAAMFGSSLALMISDIPFDGPIAGVIVGMIDGEYIINPTGEQLEKSSINLTVA
GTKDAINMVEAGAKEVSEEAILEAIMFGHEEIKKLIAFQEEIAAEVAKEKSAVQLYELDA
DLTAELKTAVEEDMNAAVQVNEKQARNEAIAAVRERALEAYADSEDDIKKQAGQVLDKMV
KDEVRRLITDEKIRPDGRGPSEIRALSSEVGVLARTHGSGLFTRGQTQAMSICTLGALGD
VQIIDGLGLEETKRFMHHYNFPLFSVGETGFLRGPGRREIGHGALGERALEAVIPNEKDF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKKGENYTVLSDI
QGMEDHLGDMDFKVAGTADGVTALQMDIKIDGLSREILEEALTQAKIGRLHILESMIATI
NTPRTSLSKFAPKIIMVKINPDKIRDVIGPGGKVINKIIDETGVKIDTEQDGTIFISSVD
EEMNAKAKAMIENIVREAKVGEYYEGAVKRIEKFGAFVELFPGKDGLLHISEIQEERTKE
VEDVLKMGDIVKVKVIEIDRQGRVNLSRKTVLKEEKEAAEKA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacaaaaaaaacctattcatttgactgggctggccgtgaactaaaggtcgaa
gtcggtcaactggctaaacaagcgaacggagcggcattgatccgttacggcgatacagca
gtactttccactgctacggcatcaaaatcaccgaagccgttggatttctttccacttacg
gtgaactatgaagagcgccaatacgcagtcggaaaaatcccgggcggatttatcaaacgc
gaagggcgtccgtctgaaaaagcgactttgatcagccgcttgattgaccgtccattgcgt
ccgctattccctgatggtttccgtaacgaggtgcaagtcatttccatggtcatgtcagtc
gatcaggactgcccatctgaaatggctgcgatgtttggatcgtcactcgctttgatgatt
tcagatattccattcgacgggccaatcgcaggcgtcatcgtcggcatgattgatggcgag
tacattatcaacccgacaggcgaacaactagagaaaagctcgatcaacttaacggttgcc
ggtacaaaagacgccatcaatatggtagaagccggtgcgaaagaagtgtctgaagaggct
attcttgaagcgatcatgttcggtcacgaagaaatcaagaaattgatcgctttccaagaa
gaaatcgctgcagaagtggctaaagaaaaatcagcggtccaattatacgaattggatgcg
gacttgacggctgaactgaaaacggctgttgaagaagacatgaatgcagctgttcaagta
aacgaaaagcaagcgcgtaatgaagccattgccgctgttcgcgaacgtgcgcttgaagcc
tatgcagattcagaagacgatattaaaaaacaagcaggccaagtgcttgataaaatggtt
aaagatgaagtacgtcgcctgatcacggatgaaaaaattcgtccagacggtcgcggccca
tccgaaatccgtgcactttcttctgaagtcggcgttcttgcacgtactcacggttctggc
cttttcacgcgcggccaaacgcaggcaatgagcatctgtacccttggcgcacttggtgat
gttcaaatcatcgatggccttggcttggaagagacgaagcgttttatgcaccattacaat
ttcccattgttctctgtcggggaaactggcttcttgcgcggccctggccgtcgcgaaatc
ggccacggtgctttaggcgaacgggcgcttgaagcggttattccaaatgaaaaagatttc
ccttatacgattcgtctcgtttccgaagtattggaatcgaacggttcaacatcacaagcc
agtatttgtgcttcgactttggcgatgatggacgcgggtgtaccgattaaagcaccggtt
gccggcattgcaatgggccttgtgaaaaaaggcgagaactatacggttctgtctgacatc
caaggaatggaagaccatctcggcgatatggactttaaagttgccggaacagcagatggt
gtcactgcccttcaaatggatattaaaattgacggcttgtcccgtgaaatcctagaagaa
gcattgacacaagcgaaaatcgggcgcctgcacattctagagtcgatgattgcgacgatc
aacacaccgcgcacgagcttgtctaaatttgctccgaagatcatcatggtgaagatcaat
ccagataaaatccgcgacgtcatcggaccgggcggcaaagtcatcaataaaatcatcgat
gaaacgggcgttaaaatcgataccgaacaagacggcacgatattcatttcttctgtagat
gaagaaatgaatgcgaaagcgaaagcgatgatcgaaaacatcgtacgcgaagcgaaagtc
ggcgaatattacgaaggtgctgttaagcgcatcgaaaaattcggcgcattcgttgaattg
ttcccaggaaaagatggccttctccacatttcagaaatccaggaagaacggacaaaagaa
gtggaagatgtcttgaaaatgggcgatatcgtcaaagtgaaagttatcgaaatcgaccgt
caaggacgcgtcaatttgtcccgtaaaacggtattgaaagaagaaaaagaagcagctgaa
aaggcttaa
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