Planococcus dechangensis: H1Q58_09885
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Entry
H1Q58_09885 CDS
T07033
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdec
Planococcus dechangensis
Brite
KEGG Orthology (KO) [BR:
pdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdec03016
]
H1Q58_09885 (truB)
Enzymes [BR:
pdec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H1Q58_09885 (truB)
Transfer RNA biogenesis [BR:
pdec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H1Q58_09885 (truB)
Prokaryotic type
H1Q58_09885 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QMT16288
UniProt:
A0A7D7MGK6
LinkDB
All DBs
Position
complement(1959827..1960756)
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AA seq
309 aa
AA seq
DB search
MEPNGILPLWKEPGMTSHDCVFRLRKILKTKKVGHTGTLDPQVDGVLPICLGRSTKVAEY
ITDQGKTYEAQVSIGFSTETEDAEGAIVEQDSSDKEITRKQLETVLASLTGDIEQIPPMY
SAVKVNGKKLYEYARKGEQVKRPVRTVHIDSIELLDEATAWRGQNIQFRIRIRCGKGTYI
RTLAVQIGEALGYPAHMSQLTRTQSGSFTKEQCVTLAEVEEIAQNGDIDSILQPLSYGLS
IFPFEEIAADLLFGIKNGQVLEAHPILQTEPFVVFTYHGKPAALYKRHPEKAGKMKPEKM
FGFPPTDEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgaatggaattcttccgttatggaaagaaccaggcatgacatcacacgactgc
gttttccgactgcgaaaaatcctgaaaacgaaaaaggtcggtcataccggaacgctcgat
ccgcaagtggatggcgttttgccgatttgtttagggcggtcgaccaaagtggccgaatac
atcacagatcaagggaaaacgtatgaagcacaagtatcaattggcttttccaccgaaaca
gaagacgcggaaggggcaatcgtcgagcaagacagcagtgacaaagaaataacgcgcaag
caattggaaacggtgttggcaagcttgactggcgatatagaacagattccaccgatgtat
tcggcagtcaaagtgaacggcaaaaagctttatgaatatgcccgtaaaggggaacaagta
aaacgtccggtacgcacggtacacattgactcgattgaattattggacgaggcaaccgcg
tggagagggcagaacatccagttccgcattcgtatccgttgcggcaaagggacttacatt
cgaacgctcgctgtccaaatcggtgaagcgctcgggtatccagcgcatatgtcacagcta
acgcgcacacaatccggcagttttacaaaagaacaatgtgtgacgcttgccgaagtagag
gaaattgcgcaaaatggggatatcgattctattttgcagccattgtcatatggcttgagt
attttcccttttgaggaaattgcagcggatttgctgttcggcatcaagaatggacaagtg
ctcgaagcacatccgatcttgcaaacggaaccgtttgtcgttttcacctatcatggcaaa
ccagcagcgttatacaaaaggcatcctgaaaaggctggcaaaatgaaacccgaaaaaatg
tttggatttcctccaacggacgaggtgtaa
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