Planococcus dechangensis: H1Q58_11060
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Entry
H1Q58_11060 CDS
T07033
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pdec
Planococcus dechangensis
Brite
KEGG Orthology (KO) [BR:
pdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdec03400
]
H1Q58_11060 (addB)
Enzymes [BR:
pdec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H1Q58_11060 (addB)
DNA repair and recombination proteins [BR:
pdec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H1Q58_11060 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_19
AAA_16
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QMT16510
UniProt:
A0A7D7MER4
LinkDB
All DBs
Position
complement(2199456..2202932)
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AA seq
1158 aa
AA seq
DB search
MSLRIVYGRAGTGKTRFVQEEIADSLKDQADGDPIFLIVPDQMSFSTEYRLSAAYGMNGM
IRAQAVTFKRLAWRVLQEVGGISRKEIDTFGYRMLIRSLLEEHRDEFNLFRRAAGKRGFT
DQIEQLIKEFSRYCIDCDELGTIRSSLETAGAPRTLQDKAADLELILLEIDRRLGKVFVD
SEGHLGLLSEKIRHSEMIKQSVIYIDGFVSFTAREFQIIEELLKHAKSVTIVLPMDETSS
AEDEQSLFYQSAVTASRLTDLAAAEGIELEPEVYLRETKRFNNEELMHVERFIETFPAPS
IQGQGAVELVEASNRRAEIHELARSIRQQVMEGCRYHDIAVLYRQPEVYDELINTIFPQY
EIPYFISQKKSMLHHPLIEFSRSALEAVIGNYAYEPVFRALKTDLFFPEGNVTKWRERGD
QLENFVLANGIYGERWFDDKRWVYKKYRGLEFHSGIQTDEELALQMELQTVRDVVRDPLE
RLKTRLNDCVNGRDFATVLFQFIEELDVYSKIQLLKDREEADHQLLAATEHEQAWNQWVG
VLDQFVLMFGDKELDLQSAARILDEGFETLEFSRIPPSLDQVTIAKMDLARLMDIRSVFI
IGASDGVLPQRIEHEGLLTDAEREWFQKIGIELAPSSRMRLMDETYMAYRSFSSASDRLS
VSYPIADEEGKALLPSLYIRKIAELLQLEPKLAAIGPEELHEPDALEYISHPRATLSHLA
AQIRSGELTGHWQAVLDYYREDPLWSSIVQQIFKPLSLTKAEKLSEETAESLYGAPIASS
VSRIETYHSCQFAHYAAYGLKLEERSHYRLAAPAMGDLFHAAIKWISDEVMQLGVSWSSL
SKEQCADLAKRAIEQLSPYFVNQILLSSHRYRYIQYKLEGIIRQTAFMLSKHAQVSGFVP
VALEVGFGTKEAIPPLDIPLERGRKMNVRGRIDRIDSTDIGGKPYLRVVDYKSSKQGLDL
GEVYHGLALQTFTYLDVALTHSKRWLGEQAEPAGVLYFHMHNPMLKMTKLLTAEELEGEL
AKSFKMNGLVVEDPEVIQAMDDQIDGYSNVIPVRLNKNGSVSKGSSKTVEKEDMETIREF
VRKKHQGAGNGILDGRTDVSPYRLKNDTPCQFCNFRAVCQFDPSDPDQTYRKLPVLSSEQ
AVEKIRKEVARDDTKKTE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacgcattgtttacgggcgtgcaggaactggaaaaacccgttttgtccaagag
gaaatcgccgatagtttaaaagaccaagcggacggtgatccgatatttctcattgttccc
gaccaaatgtcgttttctacggagtatcggttgtccgctgcatacggcatgaatggcatg
atccgtgcgcaagccgtcacgttcaagcggctagcctggcgtgtattacaggaagttggc
ggaatcagccgcaaagaaattgatacatttggctaccgcatgctaatccgcagtttgctc
gaagaacatagagatgaatttaatttgtttagaagagcggcagggaagcggggcttcact
gaccagattgaacaattgatcaaggaattttcccgttattgcatcgattgcgatgaactc
ggcaccatccgttcatcgctagaaacagctggggcacctaggacattgcaggataaggct
gcagacctggagctcatcttgcttgagattgaccgcagacttggcaaagtattcgtggat
tccgaaggccacctcggattgttaagtgagaaaatccggcactcagaaatgattaagcaa
tcggttatttacattgacgggtttgtcagttttacagcacgtgaattccaaatcatcgaa
gagctgttgaagcatgccaaatccgtgacgattgttttgccgatggacgaaacgagcagc
gccgaagacgaacaatctttgttttaccaatccgctgttacggcaagccgtttgacggat
ctcgccgcagcggaaggaattgagctagaaccagaagtctacttgagagaaacgaagcgc
ttcaacaatgaagagctaatgcatgtcgaacgctttatcgaaactttccccgctccttcc
attcaaggtcaaggagccgtcgaattagtcgaagcgtccaaccggcgcgctgaaatccac
gaacttgcccggtcgatccgccaacaagtgatggaaggctgccgctatcatgatattgcg
gtgctgtaccgacagccggaagtgtatgacgaattgatcaataccatttttccacaatac
gagattccttattttatcagtcaaaaaaaatcgatgcttcatcatccattgatcgaattc
agccgctctgcactcgaagccgtcattggaaattatgcatatgaaccggtttttcgggca
ttgaagacggacttgttcttcccagaaggcaatgtcactaaatggcgggaacggggagac
cagctggagaatttcgttctggccaatggcatttacggcgaacgttggtttgacgataag
cgttgggtctataaaaaataccgcggactcgaattccattcaggcatccagaccgatgaa
gagttagcgctgcaaatggaattgcaaaccgtccgcgatgttgtccgcgacccactcgag
cgtttgaaaacgcgtcttaacgactgcgtgaacggccgtgattttgccactgtcttgttt
cagtttatagaagaactcgatgtctattcgaaaatccaattgttgaaagatcgcgaagag
gccgaccatcaattgcttgccgcaaccgagcacgagcaagcctggaatcaatgggtaggc
gtgctcgatcaattcgtcctgatgttcggagataaagaactggacctccaaagcgccgca
cgcattctcgatgaaggcttcgaaaccttggagttttcccgcatcccgccgtcacttgac
caagtgacgattgccaaaatggacttggcgcgcttaatggatatccgctcggtctttatt
attggtgcaagtgatggggtcttgccgcagcgcattgaacacgaagggctcttgaccgat
gcggagcgcgagtggttccaaaaaatcggaatcgaacttgccccgagttcacgcatgcgt
ctaatggacgaaacatatatggcctatcgctcattctcttccgcttccgaccggctgagc
gtctcgtacccgattgcggatgaggaagggaaagctttgctgccttctttatatattagg
aaaatcgccgagttgcttcagcttgagcccaaactggcagcgattggcccagaagagctg
catgagccagacgctttggaatatattagccatccgcgtgcgacgctttcccacctggct
gcccaaatcagaagcggagagcttacgggacattggcaagccgtgctcgattattacagg
gaagatccgctttggtcgtcgatcgtccagcaaatattcaagcctttgagcctcacgaaa
gctgagaaattatcggaagagaccgctgaatccctctacggggcaccgattgcctcgagt
gtttcccgtatcgagacgtatcatagctgccaatttgcccattatgcggcttatggtttg
aaacttgaagagcgcagtcactaccgactggcggctccagcgatgggggatttattccat
gcggccatcaaatggatttcagatgaagtgatgcagctgggcgtttcctggtcatcgtta
agcaaagaacagtgtgcagatctcgccaagcgggcgatcgaacaattatcgccttatttc
gttaaccaaatcttgctgagttcacatcggtaccgctatatccaatataaactcgagggc
atcattcgccaaacggcattcatgttgagcaagcatgcacaagtgtcgggcttcgtgccg
gtcgcccttgaagtaggatttggcacaaaagaagcgatcccaccgctcgatattccgctt
gaacgcggccgcaaaatgaatgttaggggacgcattgaccgtatcgattcgactgatatt
ggcggtaagccttatttgcgagtcgttgactataaatcgtccaagcagggactggattta
ggcgaagtgtatcacggcctggcattgcaaactttcacgtatttggatgtcgccttgacc
cattctaaacgctggctaggggagcaggcggaaccggctggcgtgttgtatttccatatg
cacaatccgatgctcaagatgacaaaattattaacggctgaagagttggaaggagaactc
gcgaagtcgttcaagatgaacggcctcgtcgtagaagatccagaagtcattcaggcgatg
gacgaccaaatcgacggttattcgaatgtcatacccgtccgtctgaataagaacggatcg
gtctccaaaggctcgtcgaaaacggtcgaaaaagaagacatggaaaccattcgtgaattt
gtcaggaagaaacatcaaggcgcagggaacgggattctagatggccgtacggacgtttcc
ccgtaccgcttaaaaaacgatacgccatgccaattttgcaacttccgcgcggtatgtcaa
ttcgatccgagtgatcccgaccagacataccggaaattgccggtattgagttctgaacag
gcagttgagaaaatacgcaaggaggtagctcgtgatgataccaaaaaaaccgaatga
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integrated database retrieval system
