Prescottella defluvii: P9209_03500
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Entry
P9209_03500 CDS
T09037
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pdef
Prescottella defluvii
Brite
KEGG Orthology (KO) [BR:
pdef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdef03032
]
P9209_03500 (gyrB)
03400 DNA repair and recombination proteins [BR:
pdef03400
]
P9209_03500 (gyrB)
Enzymes [BR:
pdef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
P9209_03500 (gyrB)
DNA replication proteins [BR:
pdef03032
]
Prokaryotic type
DNA Topoisomerases
P9209_03500 (gyrB)
DNA repair and recombination proteins [BR:
pdef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P9209_03500 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
WFR72945
LinkDB
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Position
complement(688259..690295)
Genome browser
AA seq
678 aa
AA seq
DB search
MAAQKSDKSNTYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG
YASKVEVTMLEDGGIQVVDDGRGIPVAMHASGAPTVEVVLTQLHAGGKFDSDAYAVSGGL
HGVGISVVNALSTKVEVDINVDGYHWSQTYDHAKPGPLEQGEATSETGTTVRFWADPEIF
ETTTYNFETVARRLQEMAFLNKGLTITLTDERVAEDEVTDDVVSPTAEAPKTATETEEEA
AAPKAPKVKSRVYHYPGGLEDYVRFINRTKQPIHNSVVGFTAKGTGHELEIAMQWNSGYS
ESVHTFANTINTHEGGTHEEGFRAALTSVVKKYAKDKKLVKDKDPELTGDDIREGLAAII
SVKVAEPQFEGQTKTKLGNTEVKSFVQKACNENIAHWFEANPADAKTIVTKAVSSAQART
AARKARELVRRKSATDIGGLPGKLADCRSNDPSKCEIYIVEGDSAGGSAKSGRDSMYQAI
LPLRGKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDISKLRYHKIVLMADADVDGQ
HIATLLLTLLFRFMRPLVEQGHVYLAQPPLYKLKWQKGAAPEFAYSDRERDGLLEAGLSS
GKKINKDDGIQRYKGLGEMNAKELWETTMDPSVRVLRQVTLDDAAAADELFSVLMGEDVE
ARRSFITRNAKDVRFLDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagtcagacaagagcaacacctacggcgcttcctccatcaccgtcctg
gagggcctcgaagccgtccgcaaacgacccggcatgtacatcggttccaccggtgaacgc
ggcctgcaccacctgatctgggaggtcgtcgacaactcggtcgacgaggcgatggccggc
tacgcgagcaaggtcgaggtgaccatgctcgaggacggcggcatccaggtcgtcgacgac
ggccgcggtatcccggtcgcgatgcacgcctccggcgcccccaccgtcgaggtcgtcctc
acccagctgcacgccggcggcaagttcgactccgacgcctacgcggtgtccggtggtctg
cacggcgtcggtatctccgtcgtcaacgcgctctcgaccaaggtcgaggtcgacatcaat
gtcgacggataccactggtcccagacgtacgaccacgccaagcccggcccgctcgagcag
ggcgaggccacgtcggagaccggcaccaccgtccggttctgggccgacccggagatcttc
gagaccaccacctacaacttcgagacggtcgcgcgccgcctgcaggagatggcgttcctc
aacaagggactgaccatcaccctcactgacgagcgcgtcgccgaggacgaggtcaccgac
gacgtcgtcagcccgacggccgaggcgccgaagacggccaccgagaccgaggaggaggcc
gccgcgccgaaggcgccgaaggtcaagtcccgcgtctaccactacccgggcggcctcgag
gactacgtgcggttcatcaaccgcaccaagcagccgatccacaactccgtcgtcggcttc
accgccaagggcaccggccacgagctcgagatcgcgatgcagtggaactccggctactcg
gagtcggtgcacacgttcgcgaacaccatcaacacccacgagggcggcacgcacgaggag
ggcttccgtgccgcgctcacctcggtggtgaagaagtacgcgaaggacaagaagctcgtc
aaggacaaggatccggagctcaccggcgacgacatccgcgagggtctcgccgcgatcatc
tccgtgaaggttgccgagccgcagttcgagggccagaccaagaccaagctcggcaacacc
gaggtcaagtccttcgtgcagaaggcgtgcaacgagaacatcgcgcactggttcgaggcc
aaccccgcggacgccaagaccatcgtcaccaaggccgtgtcgtcggcgcaggcgcgtacc
gccgcccgtaaggctcgtgagctcgtccgccgcaagagcgccaccgacatcggcggcctg
cccggcaagctcgccgactgccgctcgaacgatccgagcaagtgcgagatctacatcgtg
gagggcgactctgcaggcggctcggccaagtccggccgcgactcgatgtaccaggcgatc
ctgccgctgcgcggcaagatcatcaacgtcgagaaggcccgcatcgaccgcgtcctcaag
aacgccgaggtccagtcgatcatcaccgcgttcggcaccggcatccacgacgagttcgac
atcagcaagctgcgctatcacaagatcgtgctgatggccgacgccgacgtcgacggtcag
cacatcgcgacgctgctgctgacgctgctgttccggttcatgcgtccgctcgtcgagcag
ggccacgtgtacctggcgcagccgccgctgtacaagctcaagtggcagaagggtgccgcg
ccggagttcgcgtactccgaccgcgagcgcgacggcctgctcgaggccggcctgtcgtct
ggcaagaagatcaacaaggacgacggcatccagcgctacaagggtcttggcgagatgaac
gccaaggaactgtgggagaccacgatggacccgagcgtccgcgtcctgcgtcaggtcacc
ctcgacgacgccgcggccgccgacgagctgttcagcgtcctcatgggcgaggacgtcgag
gcacgtcgcagcttcatcacccgcaacgccaaggacgtccgcttcctcgacgtctga
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