Prescottella defluvii: P9209_21730
Help
Entry
P9209_21730 CDS
T09037
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pdef
Prescottella defluvii
Pathway
pdef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P9209_21730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdef03019
]
P9209_21730
03016 Transfer RNA biogenesis [BR:
pdef03016
]
P9209_21730
Enzymes [BR:
pdef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P9209_21730
Messenger RNA biogenesis [BR:
pdef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P9209_21730
Transfer RNA biogenesis [BR:
pdef03016
]
Prokaryotic type
tRNA degradation factors
P9209_21730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_NusA_1st
KH_KhpA-B
KH_PNO1_2nd
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
WFR74665
LinkDB
All DBs
Position
complement(4155415..4157673)
Genome browser
AA seq
752 aa
AA seq
DB search
MTVNSAIEVEEGVFESSAVIDNGSYGTRTIRFETGRLAQQAAGSVVAYLDDETMLLSATT
ASKQPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVLSLDPKDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSDENKKG
QWVAFPTVEQLEGAVFDMVVAGRVVESGDVAIMMVEAEATENVISLIDGGAQAPTEAIVA
EGLEAAKPFIASLCAAQQSLAEKAAKPTGEYPVFPAYQDDVYAAVEAAATEKLSAALSIA
GKQERDDKTDEVKVEVLEQVAPQFEGREKEIGAAFRSLTKKLVRQRILRDQFRIDGRGIT
DIRSLSAEVAVIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHHYNF
PPYSTGETGRVGSPKRREIGHGALAERALVPVLPSQEEFPYAIRQVSEALGSNGSTSMGS
VCASTLSLLNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDILGAEDAFGDMDFKVAGT
KNFVTALQLDTKLDGIPSQVLAGALSQAHDARTTILEVMAEAIESPDEMSPYAPRITTIK
VPVDKIGEVIGPKGKMINSITEETGANISIEDDGTVYVGAADGPSAQAAIDKINAIANPQ
LPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRIAKVEDVVNVGGKIRVEI
ADIDNRGKISLIPVEDDAAGASAESGSEPAAE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcaattctgcgatcgaggtcgaagagggcgtgttcgagtcctccgccgtcatc
gacaacgggagctacggcacccgcaccattcgtttcgagaccggtcgcctcgcgcagcag
gccgccggctccgtcgtcgcctacctggacgacgagaccatgctgctgtcggccaccacg
gccagcaagcagcccaaggagcacttcgacttcttcccgctgacggtcgacgtcgaggag
cgcatgtacgccgcgggccgcatccccggctcgttcttccgtcgtgagggccgcccctcc
accgacgcgatcctcacctgccgtctgatcgaccggccgctgcgtccgtcgttcgtcgac
ggtctgcgtaacgagatccaggtcgtcgtcacggtcctgagcctcgatcccaaggatctg
tacgacgtcgtcgcgatcaacgccgcgtccgcgtccacccagatcgccggtctgccgttc
tccggccccgtcggtggcgtgcgcgtcgcgctcatcacgtcggacgagaacaagaagggc
cagtgggtcgcgttcccgaccgtcgagcagctcgagggtgccgtcttcgacatggtcgtc
gcgggtcgcgtcgtcgagtccggtgacgtcgccatcatgatggtcgaggccgaggccacc
gagaacgtcatcagcctgatcgacggcggcgcgcaggctccgaccgaggcgatcgtggcc
gagggcctcgaggctgccaagccgttcatcgcgagcctgtgcgccgcgcagcagtcgctc
gccgagaaggctgccaagcccaccggtgagtacccggtcttcccggcctaccaggacgac
gtgtacgccgcggtcgaggccgccgccaccgagaagctgtcggccgcgctgtcgatcgcc
ggcaagcaggagcgcgacgacaagaccgacgaggtcaaggtcgaggtgctcgagcaggtc
gccccgcagttcgagggtcgcgagaaggagatcggcgcagcgttccgctcgctgacgaag
aagcttgtgcgccagcgcatcctgcgcgaccagttccgcatcgacggccgtggcatcacc
gacatccggtcgctgtccgccgaggtcgccgtgatcccgcgtgcacacggttcggcactg
ttcgagcgtggcgagacccagatcatgggcgtcaccaccctcgacatggtcaagatggcg
cagcagatcgactcgctgggccccgagaccagcaagcgttacatgcaccactacaacttc
ccgccgtactccaccggtgagacgggccgcgtcggttcgccgaagcgccgcgagatcggc
cacggcgctctcgccgagcgcgccctcgtgccggtgctgccgagccaggaagagttcccg
tacgcgatccgtcaggtctcggaggcgttgggctccaacggttccacctcgatgggctcg
gtgtgcgcctcgaccctgtcgctgctgaatgccggtgtgccgctgaaggctccggtcgcc
ggcatcgccatgggcctggtctccgacgaggtcgacggcgagacccgttacgtcgcgctg
accgacatcctcggcgccgaggatgccttcggtgacatggacttcaaggtcgccggcacg
aagaacttcgtgacggccctgcagctcgacaccaagctcgacggcatcccgtcgcaggtg
ctggccggcgcgctgagccaggcgcacgacgcccgcaccacgatcctcgaggtcatggcc
gaggcgatcgagagcccggacgagatgagcccgtacgcgccgcgcatcaccaccatcaag
gtccccgtggacaagatcggcgaggtcatcggccccaagggcaagatgatcaactcgatc
accgaggagaccggtgccaacatctccatcgaggatgacggcacggtgtacgtcggtgcg
gcggacggcccgtccgcgcaggccgcgatcgacaagatcaacgccatcgccaacccccag
ctgcccaaggtgggcgagcgcttcctcggcacggtcgtcaagaccacggccttcggtgcg
ttcgtctcgctgctcccgggccgcgacggactggtgcacatctcgaagctgggcaacggc
aagcgcatcgccaaggtcgaggacgtcgtcaacgtcggcggcaagatccgcgtcgagatc
gcggacatcgacaaccgcggcaagatctcgctgatcccggtcgaggacgacgcggcgggc
gcttccgccgagtcgggctcggagcccgctgcggagtag
DBGET
integrated database retrieval system
