Pseudarthrobacter defluvii: JCQ34_01860
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Entry
JCQ34_01860 CDS
T09165
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel00260
Glycine, serine and threonine metabolism
pdel00460
Cyanoamino acid metabolism
pdel00630
Glyoxylate and dicarboxylate metabolism
pdel00670
One carbon pool by folate
pdel00680
Methane metabolism
pdel01100
Metabolic pathways
pdel01110
Biosynthesis of secondary metabolites
pdel01120
Microbial metabolism in diverse environments
pdel01200
Carbon metabolism
pdel01230
Biosynthesis of amino acids
pdel01240
Biosynthesis of cofactors
pdel04981
Folate transport and metabolism
Module
pdel_M00140
C1-unit interconversion, prokaryotes
pdel_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JCQ34_01860
09102 Energy metabolism
00680 Methane metabolism
JCQ34_01860
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JCQ34_01860
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JCQ34_01860
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JCQ34_01860
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JCQ34_01860
Enzymes [BR:
pdel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JCQ34_01860
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WJH24889
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Position
complement(383393..384694)
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AA seq
433 aa
AA seq
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MAFEQVVSPSLNADLSVLDPEIAAKIDDELGRQRDGLEMIASENHTAAAVMQAQGSVLTN
KYAEGYPGKRYYGGCEHVDVIEQLAIDRVKALFGAEFANVQPHSGAQANASVMHALIKPG
DTIMGLNLAHGGHLTHGMKINFSGKLYNVVPYQVREDTHTIDMAEVERLAQEHKPQLIVA
GWSAYARQLDFAEFRRIADSVGAYLMVDMAHFAGLVAAGLHPSPVPHAHVTTSTTHKTLA
GPRGGIILSNDPDVAKKINSAVFPGQQGGPLEHVIAGKAVAFKIAASEEFRERQERVLAG
ARILAQRLVQPDVTAKGISVVSGGTDVHLVLVDLRNCALNGQQAEDRLAAIDITVNRNAV
PFDPRPPMVTSGLRIGTPALATRGFGEDAFREVADIIAEALIADADADLSGLRHRVEALA
AAHPLYPGIAPLS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggccttcgagcaggtggtctcccccagcctgaacgccgacctgtccgtcctggacccc
gagatcgcggcaaagatcgacgacgaactgggccgccagcgcgacggcctggaaatgatc
gcttccgagaaccacactgccgcagccgtaatgcaggcgcagggctcggtactgaccaac
aagtacgccgagggctaccccggcaagcgctactatggcggctgcgagcacgtggacgtt
atcgagcagctcgccatcgaccgggtgaaagccctgttcggcgcggagttcgccaacgtc
cagccgcactccggcgcgcaggcaaacgcctcggtgatgcacgcactgatcaagcccggt
gacaccatcatgggcctgaaccttgcccacggcggccacctaacccacggcatgaagatc
aacttctccgggaagctgtacaacgtggtgccgtaccaggtccgtgaggacacccacacc
atcgacatggcggaagtggagcggctggcgcaggagcacaagccgcagctgatcgtggct
ggctggtcggcctacgcaaggcagctggacttcgctgagttccggcggatcgcggactcc
gttggtgcctatctgatggtggacatggcgcacttcgccgggctggtggccgcgggcctg
cacccgtcgccggtcccgcatgcccatgtcaccacctccaccacgcacaagacccttgcc
ggtccgcgcggcggcatcatcctgtccaacgaccccgacgttgccaagaagatcaactcc
gccgtgttcccggggcagcagggcgggccgctggagcacgtgatcgccggcaaggctgtg
gcgttcaagatcgccgcctccgaggagttccgtgagcggcaggagcgggtcctcgcaggt
gcccgcatcctggcccagcgcctggtccagcccgacgtcacggccaagggcatcagcgtg
gtgtccggaggcacggatgtgcacctggtcctcgtggacctgcggaactgcgcgctcaac
ggacagcaggccgaagaccgactcgcggcaatcgatatcaccgtcaaccgcaatgcagtc
cccttcgacccacgtcctccgatggtgacgtcgggcctgcgcatcggcacccccgccctg
gccacccgtggcttcggcgaggacgccttccgcgaggttgcggacatcatcgccgaggca
ttaatcgccgacgccgatgccgacctttccggtctgcgtcaccgcgtcgaagcactcgcc
gcagcccacccgctctacccgggcatcgcaccgctgtcctga
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