Pseudarthrobacter defluvii: JCQ34_03725
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Entry
JCQ34_03725 CDS
T09165
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCQ34_03725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdel03400
]
JCQ34_03725
Enzymes [BR:
pdel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JCQ34_03725
DNA repair and recombination proteins [BR:
pdel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JCQ34_03725
Prokaryotic type
JCQ34_03725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WJH25212
LinkDB
All DBs
Position
complement(789816..790586)
Genome browser
AA seq
256 aa
AA seq
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MFESDALFELQQEPADAISFADLAELPLAELMAADWAAALHGVEGQLRKVLTFVAAEEAA
GHQILPPPSNVLRAFRQPLADVKVLIVGQDPYPTPGHAVGLSFSVEPHVRPLPRSLVNIY
RELESDLGIPPRVHGDLSAWTNQGVLLLNRVLTVRAGAAGSHRGKGWEEITTAAVTALAN
RTAADGSRMPLVAVLWGKEAEGVRPLLAGAPAVSSAHPSPLSASRGFFGSRPFSRVNQLL
REQGALDVTWELPPSP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatcggatgcgctgttcgagctgcagcaggaaccggcggacgccatcagcttc
gcggacctggccgagctcccgctcgcggagctcatggcagccgactgggccgcggccctc
cacggcgtggaaggccaactccggaaggtgctcactttcgttgctgcagaggaggccgcc
gggcaccagatcctcccgccgccgtcgaacgtcctgcgcgccttccgccagcccctggcg
gatgtgaaggtgctcatcgtcgggcaggacccctaccccacgccgggacacgccgtcggg
ctgtcgttttccgtcgagccgcacgtccggccgcttccccgcagcctggtgaacatttac
cgggagctggaatcggacctgggcattccgccgcgtgtccatggcgacctgtcggcctgg
acgaaccagggcgtactgctcctgaaccgggtgctcacggtccgggcgggggcggcgggt
tcccatcgcggcaagggctgggaggagattacgacggcggcagtcaccgcgctggcgaac
cgcacagctgcggacgggtccaggatgccgctggtggcggtgctgtggggcaaggaggcc
gagggcgtccggccgctcctggccggagcgcccgctgtcagcagcgcccaccccagtcca
ttgtctgcttcgcgcgggttctttggctcccggccgttcagccgcgtcaaccaactgctg
cgggaacaaggtgcgctggacgtaacctgggaactgccgccgtcgccctag
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