Pseudarthrobacter defluvii: JCQ34_05420
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Entry
JCQ34_05420 CDS
T09165
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel00020
Citrate cycle (TCA cycle)
pdel00480
Glutathione metabolism
pdel00720
Other carbon fixation pathways
pdel01100
Metabolic pathways
pdel01110
Biosynthesis of secondary metabolites
pdel01120
Microbial metabolism in diverse environments
pdel01200
Carbon metabolism
pdel01210
2-Oxocarboxylic acid metabolism
pdel01230
Biosynthesis of amino acids
pdel04146
Peroxisome
Module
pdel_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdel_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JCQ34_05420
09102 Energy metabolism
00720 Other carbon fixation pathways
JCQ34_05420
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JCQ34_05420
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JCQ34_05420
Enzymes [BR:
pdel01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
JCQ34_05420
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
WJH25518
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All DBs
Position
1154596..1156815
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AA seq
739 aa
AA seq
DB search
MSKIIYTHTDEAPMLATYSFLPIIEAFASTAGVEVETRDISLAGRIIAVFGDYLTPEQQI
GDALAELGELAKTPEANIIKLPNISASIPQLKAAIAELQGQGYALPDYPDNPSSDEETAV
RSRYDKIKGSAVNPVLREGNSDRRAPLSVKNYARQNPHSMGAWTPESKTNVATMGQDDFR
SNEKSVVIESEGTISIQLVREDGSVKVLKKAFPVLAGEVIDGTVMRAAALDEFLKAQVAR
AKEEGVLFSAHLKATMMKVSDPIIFGHVVKAYFSELFDTYGKQLSAAGISPNNGLAAILS
SLEDLPAEVREGVQNLIKKGLEDGPALAMVDSDKGITTLNVPSDVIVDASMPAMIRSSGH
MWGPDGKEADTLAVLPDSSYAGIYQVVIDDCRANGAYDPTTMGTVPNVGLMAQAAEEYGS
HDKTFEIQEAGKVQIVDGSGNVLLEHEVSEGDIWRACQTKDAPIRDWVKLAVTRARASQT
PAVFWLDEDRAHDANLITKVNEYLKEHDTAGLDIQIMAPVKAIAFTLERIRKGEDTISVT
GNVLRDYLTDLFPILELGTSAKMLSVVPLMNGGGLFETGAGGSAPKHVQQLLKENHLRWD
SLGEFLALAVSFEHLATTTGNARAQVLADTLDRATGTFLLENKSPSRRAGELDNRGSHYF
LARYWAEELAKQTDDADLAAAFSSVAGELSSKEETIVGELAEVQGSPVDIGGYYRPEDAK
ASAVMRPSATLNKVIASLS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagattatctacacccacaccgacgaagcgccgatgctggctacctattcgttc
ctgcccatcatcgaggcattcgcttcgacagcaggtgtggaggtggagacccgcgacatt
tcgctcgccggccgcatcatcgccgtcttcggtgactacctgacccccgaacagcagatc
ggtgacgcccttgctgaactcggtgagctggcgaagacgccggaagccaacatcatcaag
ctgcccaacatcagcgcctccatcccgcagctgaaggccgccattgcagagctgcagggc
cagggctacgcactgccggactacccggacaacccgtcctcggacgaggaaaccgccgtc
cgctcgcgctacgacaagatcaagggctccgccgtgaacccggtcctgcgtgaaggcaac
tcggaccgccgcgcgccgctgtccgtcaagaactacgcgcgccagaacccgcactccatg
ggcgcctggaccccggagtccaagaccaacgtggccaccatgggccaggacgacttccgt
tccaacgagaagtccgtggtcatcgagtccgagggcaccatctccatccagctggtccgt
gaagacggctccgtcaaggtcctgaagaaggccttcccggtcctggccggcgaggtcatc
gacggcaccgtgatgcgcgccgccgccctggacgagttcctgaaggcccaggtggcccgc
gccaaggaagaaggcgtgctgttctcagcccacctgaaggccaccatgatgaaggtctcg
gaccccatcatcttcggccacgtggtgaaggcttacttctccgagctgttcgacacctac
ggcaagcagctctccgctgccggcatcagccccaacaacggacttgccgcgatcctcagc
agccttgaggacctgcccgcggaagtccgcgagggcgtccagaacctgatcaagaagggc
ctggaagacggccccgccctggccatggtggactccgacaagggcatcaccaccctgaac
gtccccagcgacgtcatcgtggacgcctccatgcccgccatgatccgcagctccggccac
atgtggggcccggacggcaaggaagccgacaccctggccgtccttccggacagctcctac
gccgggatctaccaggtggttatcgatgactgccgcgccaacggcgcctacgatcccacc
accatgggcaccgtccccaacgttggcctcatggcgcaggctgccgaggaatacggcagc
cacgacaagaccttcgaaatccaggaagccggcaaggtgcagatcgtggacggctccggc
aacgtcctgctcgaacacgaggtgtccgagggcgacatctggcgcgcctgccagaccaag
gacgcccccatccgcgactgggtcaagctggctgttacccgcgcccgcgcctcccagacc
ccggccgtgttctggctggacgaggaccgggcgcacgacgccaacctcatcaccaaggtc
aacgagtacctgaaggagcacgacaccgcgggcctggacatccagatcatggcccccgtc
aaggccatcgccttcacgctggagcgcatccgcaagggtgaagacaccatctccgtcacc
ggcaacgtgctccgcgactacctcacggacctgttccccatcctggaactgggcaccagc
gccaagatgctctcggttgttccgctgatgaacggcggcgggctcttcgagaccggcgcc
ggcggctccgcccccaagcacgtccagcagctgctgaaggaaaaccacctccgctgggac
agcctgggcgagttcctggccctggccgtcagcttcgagcacctggccaccaccaccggc
aacgcccgcgcccaggtgctggccgacaccctggaccgcgccaccggcaccttcctgctg
gagaacaagtccccgagccgccgcgccggcgagctggacaaccgtggcagccactacttc
ctggcccgctactgggctgaagagctggccaagcagacggacgacgccgacctggccgcc
gcgttcagctcggtcgccggcgagctttcctccaaggaggaaacgatcgtgggcgagctg
gccgaggtccagggctcacccgtggacatcgggggctactaccgcccggaggacgccaag
gcttccgcagtgatgcgtccttccgccaccctgaacaaggtcatcgccagcctgagctag
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