Pseudarthrobacter defluvii: JCQ34_05590
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Entry
JCQ34_05590 CDS
T09165
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel00020
Citrate cycle (TCA cycle)
pdel00190
Oxidative phosphorylation
pdel00650
Butanoate metabolism
pdel00720
Other carbon fixation pathways
pdel01100
Metabolic pathways
pdel01110
Biosynthesis of secondary metabolites
pdel01120
Microbial metabolism in diverse environments
pdel01200
Carbon metabolism
Module
pdel_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdel_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pdel_M00149
Succinate dehydrogenase, prokaryotes
pdel_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JCQ34_05590
00650 Butanoate metabolism
JCQ34_05590
09102 Energy metabolism
00190 Oxidative phosphorylation
JCQ34_05590
00720 Other carbon fixation pathways
JCQ34_05590
Enzymes [BR:
pdel01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JCQ34_05590
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
Thi4
DAO
FAD_oxidored
GIDA
Motif
Other DBs
NCBI-ProteinID:
WJH25548
LinkDB
All DBs
Position
complement(1196275..1198074)
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AA seq
599 aa
AA seq
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MQVHKYDVVIVGAGGAGMRAAIESGQRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEVMAKEAIDAVLDLEKMGLPFNRTPEGRIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHNVEFYNEYYVLDLLTVEEDAVREDGTP
FKQKRVAGVVSYDLASGELHVFQAKSVVFASGGAGKVFKTTSNAHTLTGDGMGIAFRRGI
PLEDMEFFQFHPTGLAGLGILLSEAARGEGAILRNSEGERFMERYAPTIKDLAPRDIVAR
SMANEVREGRGCGPNKDYVLLDLTHLEPAHIDAKLPDITEFARTYLGVEPYTEPVPVFPT
AHYAMGGIPTNIQTEVLQDNDTVIPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGKRAG
IAAAEYAKTAQFVELPENPLAYTTELLDVARNGTGDEKVAQIRKELQDTMDANMQVFRTA
DTLNQVLRDIASFEERYKRINVQDKGKRFNLDLLEAVELGFLLELAKVMTVAALHREESR
GGHFREDFPERDDEKFMKHSMAYKDDHAPADGSAESIAGIRLATKPVVFTRYEPMVRKY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccataagtacgacgtcgtcatcgtcggtgccggtggcgctggcatgcgcgcc
gcgatcgaatccggtcagcgcgcgcgcacagcagtactgaccaagctctaccccacccgc
tcgcacacgggtgcggcacagggtggcatgtgtgctgcccttgccaacgtcgaggaagac
aactgggaatggcacaccttcgacaccgtcaagggcggcgactacctggttgaccaggac
gcagccgaggtcatggccaaggaagccatcgacgccgtgctggacctggaaaagatgggc
ctgcccttcaaccgcacgcccgagggccggatcgaccagcggcgcttcggcggccacacc
cgcgaccacggcaaggcaccggtccgccgtgcatgctacgccgcggaccgcaccggccac
atgatcctgcagaccctgtaccaaaactgcgtcaagcacaacgttgagttctacaacgag
tactacgtcctggacctgctgaccgttgaagaggacgctgtccgcgaagacggcacgccc
ttcaagcagaagcgtgttgccggcgtcgtctcctacgacctcgcgtccggtgaactgcac
gtcttccaggccaagtccgtggtgttcgcctccggcggcgcgggcaaggtcttcaagacc
acctccaacgcccacaccctgaccggtgacggcatgggcatcgccttccgtcgcggcatc
ccgctggaggacatggagttcttccagttccacccgacaggccttgccggcctgggcatc
ctgctctccgaagccgcccgcggtgaaggtgccatcctccgcaactcggagggtgagcgc
ttcatggagcgctacgcccccaccatcaaggacctggcgccgcgtgacatcgttgcccgc
tccatggccaacgaggtgcgcgaaggccgcggctgcggcccgaacaaggactacgtcctc
ctggacctgacccacctggagccggcacacatcgatgccaagcttccggacatcaccgag
ttcgcccgcacctacctgggcgtggaaccgtacacggagccggtgccggtgttccccacc
gcgcactacgccatgggcggcatccccaccaacatccagaccgaggtcctgcaggacaac
gacaccgtgattcccggcctttacgccgccggtgaagtggcctgcgtttccgtccacggc
tccaaccgactgggcaccaactcgctgctggacatcaacgtgtttggcaagcgcgccggc
atcgccgctgccgagtacgccaagaccgcacagttcgtggaactgccggagaacccgctg
gcctacaccaccgaactgctggacgttgcccgcaacggcaccggcgacgaaaaggtggcg
cagatccgcaaggaactgcaggacacgatggatgccaacatgcaggtgttccgcaccgcg
gacaccctgaaccaggtgctgcgcgacatcgcatccttcgaggagcggtacaagcgcatc
aacgtccaggacaagggcaagcgcttcaacctggacctgctcgaggccgttgagctcggc
ttcctgctggaactggccaaggtcatgaccgtggccgccctgcaccgcgaggaatcccgc
ggcggacacttccgcgaggacttccccgagcgtgacgacgagaaattcatgaagcactcc
atggcgtacaaggatgaccatgcgccggctgacggatcggcggaatcaatcgccggcatc
cgcctcgccaccaagccggttgtctttacccgctacgagccgatggtgaggaagtactaa
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