Pseudarthrobacter defluvii: JCQ34_06850
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Entry
JCQ34_06850 CDS
T09165
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdel
Pseudarthrobacter defluvii
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdel03016
]
JCQ34_06850 (truB)
Enzymes [BR:
pdel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JCQ34_06850 (truB)
Transfer RNA biogenesis [BR:
pdel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JCQ34_06850 (truB)
Prokaryotic type
JCQ34_06850 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WJH25768
LinkDB
All DBs
Position
1491096..1492100
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AA seq
334 aa
AA seq
DB search
MPVILAVPVVRTAPPTCADILGGVLSGLVIVDKPQGWTSHDVVGRMRRLAGTRKVGHAGT
LDPMATGVLVLGINKATRLLTYIVGTSKTYTATIRLGQSTVTDDAEGEVTYTTSAAGITE
QEIYDGVAALTGELQQVPSSVSAIKVNGERAYARVRSGEDVKLAARPVTIHRFDVHAIRR
DAAASVVDLDVTVECSSGTYIRALARDLGNALGVGGHLTALRRTQVGPYTLDQARTLEQL
AEELNVLDMSLAARALMPNRELTAEETAEISFGRRITAGTAPGTPGAATAEHPAAGFAPD
GSLVALLADAGSYAKPVLVFAPGNGAAATAAAEA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcatcctagctgtcccggtggtccgtacggcgcccccaacctgcgccgatata
ctgggaggcgtgctttctggactggtgatagtggacaagccgcagggatggaccagccat
gatgtggttggcaggatgcggcgcctcgcagggacccggaaagtagggcacgctggaaca
ctcgatcccatggccacaggcgtgctggtgctcggcatcaacaaagccacccgcctgctg
acctacatcgtgggcacctccaagacctacaccgccaccatccggctgggacagtccacg
gtgacggatgacgctgagggcgaggtcacgtacaccaccagcgccgccggcatcacggag
caggaaatttacgacggcgtcgcggcgctaacgggggagctgcagcaggtgcccagcagc
gtcagcgccatcaaggtgaacggcgaacgcgcctacgcacgcgtgcggtccggcgaggac
gtcaagctcgccgcgcgcccggtcaccatccaccgcttcgacgtccacgccatccgcagg
gacgccgcggccagcgtcgtggacctggacgtgacggtggagtgctcctccggtacgtac
atccgtgccctggcccgggacctgggcaatgcccttggtgtcggcggccacctcaccgcc
ctccgccggacccaggtgggtccctacacccttgaccaggcccgcactctggaacagctc
gccgaagagctcaacgtcctggacatgtccctggccgcgcgtgccctgatgcccaaccgc
gaactcaccgccgaggaaaccgcagaaatctcgttcggccggcggatcactgccggtacg
gctcccggtacccccggcgccgccaccgctgagcaccctgcggcaggcttcgcccccgac
ggcagcctggtggcgctcctcgccgatgcgggcagctacgccaaaccggtcctggtcttc
gcgcccggcaacggggcggccgccaccgcggctgcggaggcataa
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