Pseudarthrobacter defluvii: JCQ34_07185
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Entry
JCQ34_07185 CDS
T09165
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JCQ34_07185
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdel01007
]
JCQ34_07185
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdel03016
]
JCQ34_07185
Enzymes [BR:
pdel01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
JCQ34_07185
Amino acid related enzymes [BR:
pdel01007
]
Aminoacyl-tRNA synthetase
Class II (U)
JCQ34_07185
Transfer RNA biogenesis [BR:
pdel03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JCQ34_07185
Prokaryotic type
JCQ34_07185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
WJH25828
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Position
1555581..1558124
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AA seq
847 aa
AA seq
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MRIPLSWLREFAAVPAEATAEDVMAELVKVGFEEEAVHRPTETLRGPIVVGQVLSLVKEP
QSNGKTINWCQVRVVPEGKEQTLTGDGIDPSGVQGIICGAHNFVEGDKVVVTLPGAVLPG
DFHISARKTYGHLSAGMIASVRELGIGEDHDGILVLSRIGLDPEVGTDAMELLGLYDQAA
EINVTPDRGYAFSIRGVAREYAHATGTSFTDPASRVQAPAELSGGYGIKLNDDAPIYGKP
GCDRFVARTVRGVDATKPTPQWMVSRLRLAGIRSISLPVDISNYVMLELGQPTHCYDLDK
LSGDIVVRRASAGEKITTLDGKERTLDAEDLLITDDSGAIGIAGVMGGAATEVSDSTSNV
LVESAHFDEVSIGRSRRRHKLPSEASKRFERGVDWQVAGIAAQRVVDLLVELAGGTADET
GTDVGTAPETVTIELPAGFAAARIGIDFTEDQIVTSLEDLGAAVVKNDGGWTVTPPSWRS
DLETKEDLTEEIARLVGYDKIPATLPVAPPGRGLTRVQQQRRRLIQALADFGLTEVLAYP
FVSKAANDTFGVAEQGAERSAVKLANPISEEHGYLRTSILPGLIEVAKRNHSRGFRDLAL
FESGLVFLPGESVGTASIPPLGIKPSDEVLDDLFDGVPEQPFHLAAVLTGHDSPAAASHT
PRAWDWADALDVARLAGDVLGVDLVVSQGSHQAFHPGRTARLALRTGETVGYAGELHPKL
LAASDMPARSVALEINADALFEAAPDVIVARHISTFPVATQDVALVVPADVPADEVLAAL
REGAGELLEDVALFDVYAGKGIEEGRKSLAFGLRFRAADRTLTADEASAARESAVALAAE
RFGAVQR
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtatcccactttcctggctgcgtgaattcgcggcagtaccggccgaagcaacggcc
gaagacgtcatggcagagctggtcaaggtcggcttcgaggaggaggcggtccaccgcccc
acggaaaccctgcgcggccccatagtggtgggccaggtcctgagcctggtcaaggaaccg
cagagcaacggcaagaccatcaactggtgccaggtccgcgttgtccccgaaggcaaggaa
cagaccctcacgggggacggcatcgacccctccggtgtgcagggcatcatctgtggcgcc
cacaacttcgtggaaggagacaaggtggtggtcaccctcccgggtgccgtgctgcccggc
gacttccacatctccgcccgcaagacctatggccacctctccgccggcatgatcgcctcc
gtccgcgaactggggatcggcgaggaccacgacggcatcctggtgctgtcccgcatcggg
cttgacccggaagtgggcaccgacgccatggagctgctgggcctctacgaccaggcggcg
gaaatcaacgtcaccccggaccgcggctacgccttctccatccgcggcgtggcccgcgaa
tacgcgcacgccaccggaacctccttcacggatcccgcatccagggtgcaggccccggcc
gagctttccggcggctacggcatcaagctcaatgacgatgcccccatctacggcaagccc
ggctgcgaccgcttcgtagcacgcaccgttcgtggagtggatgcaacgaagccgacgccc
cagtggatggtgtcccggctccggctggccggcatccgttccatctcgctgccggtggac
atttccaactacgtcatgctcgagctgggccagcccacccactgctacgacttggacaag
ctgtccggggacatcgtggtgcggcgcgcttccgccggcgagaagatcaccacgttggac
ggcaaggaacgcacccttgatgccgaggacctgctgatcaccgacgactccggcgccatc
gggatcgccggcgtcatgggcggcgcggcgactgaggtgagcgattcgacgtcgaacgtc
ctggtggagtcggcgcacttcgacgaggtgtccatcgggcgctcgcggcgccggcacaag
ctgccgtccgaggcttccaagcgcttcgagcgcggcgtggactggcaagtggccggcatc
gccgcccagcgcgtggtggacctcctggtggaactggccggcggcacggcagatgagacc
ggcaccgacgtcggcaccgctcccgaaaccgtcaccatcgagctgcccgcaggcttcgcc
gccgcgcggatcggcatcgacttcaccgaggaccagatcgtcacctcccttgaggacctg
ggtgctgcagtggtgaagaacgacggcggctggaccgttacgccgcccagttggcgcagc
gacctggagaccaaggaagacctgaccgaggagatcgcccggctggtgggttacgacaag
atccccgccacgcttccggtggcccctcccggccgcggcctcaccagggtccagcagcag
cgccggcgcctgatccaggccctggcggacttcgggcttaccgaggtcctggcgtacccg
ttcgtgtccaaggccgccaatgacaccttcggggtggcggagcagggtgcggagcggagc
gccgtcaagctcgccaaccccatcagcgaggagcacggctacctgcgcacctccatcctg
cccgggttgatcgaggtggccaagcggaaccactcgcgcggcttccgtgacctggccctc
ttcgaatccggcctggtgttcctgcccggtgaaagcgtgggcacagcctccatcccgccg
ctgggaatcaagccctccgacgaggtgctggacgacctgttcgacggcgtcccggagcag
ccgttccacctcgccgcggtcctcaccggccacgattccccggcagccgcgtcccacacc
ccccgggcgtgggactgggccgatgcgctggacgttgcccgccttgccggcgatgtcctc
ggcgtggaccttgtggtcagccagggcagccaccaggcattccatcccggccgcaccgcc
aggcttgcactgcggacgggggaaaccgtggggtacgcgggcgaactgcatcccaagctg
ctggcagcctcggacatgccggcccgttccgttgcactggaaatcaacgccgacgccctg
tttgaggcggctccggacgtgatcgtggcccgccatatctccacgttccccgtggcaacc
caggatgtggccctggtggttccggccgacgtgccggcagacgaggttctcgccgcactc
cgcgaaggggccggtgagctgctggaggacgtggcgctgttcgacgtctatgcaggcaag
ggcatcgaggaaggcaggaagtcgctggccttcggactccgtttccgtgccgctgaccgc
accctgaccgccgatgaagcctcggcagcccgcgaaagcgccgtggccctcgcggccgag
cgcttcggagctgtccagcgctaa
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