Pseudarthrobacter defluvii: JCQ34_07250
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Entry
JCQ34_07250 CDS
T09165
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCQ34_07250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdel03000
]
JCQ34_07250
03400 DNA repair and recombination proteins [BR:
pdel03400
]
JCQ34_07250
Enzymes [BR:
pdel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JCQ34_07250
Transcription factors [BR:
pdel03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JCQ34_07250
DNA repair and recombination proteins [BR:
pdel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JCQ34_07250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WJH25841
LinkDB
All DBs
Position
complement(1570115..1571608)
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AA seq
497 aa
AA seq
DB search
MDFWQRYRAIDARDPRFDGQFFTAVRSTGIYCRPSCPARTPKAANVTFYETSAAAHEAGY
RACKRCLPEAVPGTPAWNVRQDVAGRAMRLINDGVINRDGVAGLAARLGYSPRQLNRILA
QELGAGPLSLARAARAQTARTLLVSTSMKLADVAFAAGFSSVRQFNETIAEVFAMTPTAL
RQTSRHPATAGGTTALTLGLPFRPPFDPGIFSFLAVRAIPGIEEGTPTSYARTLRLPHGD
ARFRVEYDGGARGRPLTLTVGAVDLRDLPALLSRVRRLFDLDADPEAIDGALAADPRLAT
SVAQAPGMRMPGALDPQELLVRAMVGQQITVAAARTALTQLSAAGSPTAAPGEGLDRLFP
TPAQIAAAGHLLRGPRRRIESLVHAATAMADGRLEFGYGDDVAGLRAKLLPLPGVGPWTV
GYVAMRVLGAPDIFLANDAAVRNGIRALHNGNSANGNSVLSPDFRESSPWRSYATMHLWR
AAARPALTTNAPAKGMP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggacttctggcagcgctaccgggcaatcgatgcgcgcgacccccgcttcgacggccag
ttcttcaccgccgtccgcagcaccgggatctactgccgcccctcctgccccgcccggact
cccaaggccgccaatgtgacgttctatgaaacgtccgcagcggcccacgaggcagggtac
cgggcgtgcaagcgctgcctgccggaggcggtgccgggcaccccggcctggaatgtgcgg
caggatgttgcgggccgggcgatgcggctgatcaacgacggcgtgatcaaccgggacggg
gtggcaggccttgccgcccgactgggttattcgccccggcagcttaaccggatcctggcc
caggaactgggcgccgggcccctgtccctggcccgggcggcgagggcccagacggcacgc
accctgctggtgtccacctccatgaagctcgccgacgtggcgtttgcggcgggcttcagc
agcgtccggcagttcaacgaaaccatcgccgaagtgttcgcgatgacgcccaccgccttg
cgtcaaacgtcccggcacccggcaaccgccggaggcacgaccgccctgaccctgggcctg
cccttccggccgcccttcgacccgggcatcttctccttcctggcggtccgagccatcccc
ggaatcgaggaggggacgcccacctcctacgcccggaccctgcggctcccccatggtgac
gccaggttccgggtggagtacgacggcggcgcccggggacggccgctgacgctcaccgtc
ggcgcggtggacctgcgcgaccttcctgcactgctcagccgcgtgcgccggcttttcgac
ctcgacgcggacccggaagcgatcgacggcgcccttgccgcagacccgcggctggccacc
tccgtcgcccaggcaccggggatgcggatgcccggagcgctggatccccaggaactgctg
gtccgggccatggtgggccagcagattacggtagcggcagcccggaccgcgttgacccag
ttgtcggctgccgggagtcccaccgccgcacccggcgaaggcctggaccggctgttccct
acccctgcgcagatcgcggcggccggacatctgttgcgcggtccgcggcgcaggatcgag
tcgctggtgcacgccgcgacagcgatggctgacggacgccttgagttcgggtacggggac
gacgtggccggcctccgcgcgaaactgctgcccttgcccggggtggggccgtggaccgtg
gggtacgtggcaatgcgcgtcctgggcgccccggacatcttccttgccaatgacgccgcg
gtccggaacgggatccgcgccctccataatgggaacagcgccaacgggaacagcgtcctg
agccctgacttccgcgagtccagcccctggcgttcctacgccaccatgcacctttggcgt
gctgccgcccggcccgccctgacaaccaacgctcctgcgaaagggatgccatga
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