Pseudarthrobacter defluvii: JCQ34_09615
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Entry
JCQ34_09615 CDS
T09165
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
pdel
Pseudarthrobacter defluvii
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pdel03051
]
JCQ34_09615 (pafA)
Enzymes [BR:
pdel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
JCQ34_09615 (pafA)
Proteasome [BR:
pdel03051
]
Prokaryotic proteasome
Bacterial regulatory particles
JCQ34_09615 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WJH26259
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All DBs
Position
2087754..2089118
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AA seq
454 aa
AA seq
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MDKRIFGIETEFGISYSSPDSRPLAPEEVARYLFRKVVSWGRSSNVFLTNGSRLYLDVGS
HPEYATAECDDLAQLIAHDRAGELILDDLVDEAQARLAAEGFNGTVYLFKNNTDSAGNSY
GSHENYLIPRRGEFSRLAEILIPFLVTRQLIAGAGKILKTPHGATYAFSQRADHIWEGVS
SATTRSRPIINTRDEPHADAEFYRRLHVIVGDSNMSEATALMKIGTVDLVLRMIEAGVIM
RDMRMENPIRSIREISHDLSGRALVRLANGRQLTALEIQQEYLTKVTAFVKEHGAHNQHV
PVILDLWERTLHAIESGDTRGIDTEIDWAIKKKLMDNYRERHGLGLEAPRIAQLDLTYHD
ISRSRGLFYLLQSRGAVRRIVDDTVIKSAVDAPPQTTRAKLRGDFVRRAQELGRDYTVDW
VHLKLNDRAHQTILCKDPFRSVDERVDALLDSMG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagaatcttcggcatcgaaaccgagttcgggatctcttactcgagcccggac
tccaggcctcttgctcccgaggaagtggcccggtacctcttccgcaaggtggtcagctgg
ggccggtcgtccaacgtcttccttaccaacggttcgcggctatacctcgatgtagggtcc
caccccgaatatgccacggcagaatgtgacgatcttgcccagctgatcgcccatgaccgt
gccggtgaacttatccttgacgacctggtggatgaggctcaggcacggctggctgctgaa
gggttcaacggcaccgtctacctgttcaagaacaacacagactccgcgggcaactcctat
ggcagtcacgagaactacctcattccccggcgcggtgagttttcccgtcttgccgagatc
ctgattccgtttctcgtcacccggcagctcatcgccggggcaggcaagatcctgaagacc
ccccacggtgccacctacgcgttttcccagcgcgccgaccacatctgggagggtgtctcc
tccgccaccaccaggtcccgccccatcatcaacaccagggacgagccgcacgcagatgct
gagttctaccggcggctgcacgtcatcgtcggagactccaacatgtccgaggcgacggca
ctgatgaagatcggcaccgtggacctggttcttcggatgatcgaagcgggcgtgatcatg
cgcgacatgcggatggaaaaccccatccgcagcatccgggaaatctcgcacgacctcagc
ggccgcgccctggtccgcctggccaacggccgccaactcacagcccttgaaatccagcag
gagtacttgaccaaggtcacggcgttcgtcaaggaacacggcgcccacaaccagcacgtt
cccgtgattctggacctgtgggaacgcacgctgcacgccatcgagtcgggtgataccagg
ggcatcgacacggaaatcgactgggccatcaagaagaagctgatggacaactaccgcgaa
cggcacggcctgggcctggaggccccccggatcgcccagctcgaccttacctaccatgac
atttcccgcagccggggactcttctacctgctgcagtcccgtggtgcggtgcgccggata
gtggacgacacagtcatcaagagtgccgtggacgcgccaccgcaaaccacccgcgcaaag
ctccggggggactttgtccgccgcgcacaggaactggggcgcgactacacggttgactgg
gtgcacctgaagttgaacgaccgtgcccaccagacaattctttgcaaggaccccttccgc
agcgtcgatgaacgcgtggatgcgctgctggactccatgggttga
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