Pseudarthrobacter defluvii: JCQ34_09905
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Entry
JCQ34_09905 CDS
T09165
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel03030
DNA replication
pdel03430
Mismatch repair
pdel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCQ34_09905 (holA)
03430 Mismatch repair
JCQ34_09905 (holA)
03440 Homologous recombination
JCQ34_09905 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdel03032
]
JCQ34_09905 (holA)
03400 DNA repair and recombination proteins [BR:
pdel03400
]
JCQ34_09905 (holA)
Enzymes [BR:
pdel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCQ34_09905 (holA)
DNA replication proteins [BR:
pdel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCQ34_09905 (holA)
DNA repair and recombination proteins [BR:
pdel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCQ34_09905 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WJH22839
LinkDB
All DBs
Position
complement(2149978..2150994)
Genome browser
AA seq
338 aa
AA seq
DB search
MAAAQKRATRSPASNTASWRDVAPARIVLVSGPEEYLGIRAMDRIRSQVRAAAPDVELSR
MNAAGYEPGALTMQVSPSLFGESKLIEVEAVEGMNDAFLADALAYLQHPEEDAVVVLRHA
GGARGKKLLDAIRKDGWPVVDCQPLKKDADKVQFVAAEFKAAGRRINQDAVQALVNAVGA
DLSELAAACAQLIADAGTTVTTDTVDKYYGGRVEATAFKVADAAMAGNAPLALSTLRHAL
ATGADPVPLVAALASKLRTVARVAGASGSSAQIAAELGMQPWLVEQAQRDVRRWTPEGLV
RSIQVTAEADAQVKGLSRDPVYAVEQAVTVIAMSVQGR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcgcaaaagcgagcaacccgctccccggcatcgaatacggcctcctggcgg
gacgtagccccggcccggatcgtgctggtgagcgggccggaagagtacctgggcatcagg
gccatggacaggatccgttcgcaggtcagggcggctgcaccggacgttgaattgagccgt
atgaatgctgccgggtatgaacccggcgccctcaccatgcaggtgagtccctccttgttc
ggcgaaagcaagctcatcgaggtggaagccgtggagggcatgaacgatgccttccttgcg
gatgccctcgcatacctccaacatccggaggaggacgccgtcgtggtgctccgccacgcc
gggggagcgcggggcaagaagctcctggacgccatccggaaggacggctggcccgtggtt
gactgccagccgctgaagaaagacgccgacaaggtccaattcgtggccgcggagtttaaa
gcagccggccggcgcatcaaccaggatgccgtccaggcactggtgaacgccgtcggtgca
gacctgtccgaacttgccgccgcgtgcgcccaactgatcgcggacgcgggcaccaccgtc
accacggacacggtggacaaatactatggcggccgggtcgaagctaccgcgttcaaggtg
gccgacgcggcaatggcaggaaacgcgccgctggcactgtccaccctgcgccatgccctt
gccaccggcgcagacccggtgcccctggtggcagccctcgcatccaagctgaggacggtg
gcccgggtggcaggtgcctctggatcgtcagcgcagatcgccgcggagctgggcatgcag
ccctggctggtcgagcaggcgcagcgggatgtccggcgctggacgcccgagggcctggtg
cgctccatccaggtcacggcggaggctgacgcgcaggtcaagggcctgtcccgggatccg
gtctacgcggtggagcaagccgtgaccgtgattgccatgtccgtccagggcaggtag
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