Pseudarthrobacter defluvii: JCQ34_09980
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Entry
JCQ34_09980 CDS
T09165
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JCQ34_09980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdel03400
]
JCQ34_09980
Enzymes [BR:
pdel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCQ34_09980
DNA repair and recombination proteins [BR:
pdel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JCQ34_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
GatD_N
Motif
Other DBs
NCBI-ProteinID:
WJH26419
LinkDB
All DBs
Position
complement(2168450..2170477)
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AA seq
675 aa
AA seq
DB search
MPGGVPLARRLPVARVLVESSLPHLDRPFDYAVPEPLDQAAQPGTRVKVKFNGQDLSGFL
LERVEESDAGHTLVPLAKVVSPVQVLTPAVRDLATAVAARYAGTVSDVLRLAVPPRVAKL
EKDYPDSLGAKEAFPAPEAAGTPAVSAWREYRTGAAFLRHLAGGGSPRAVVNPLQGYGPA
GWPDLLAQASAAAYTSGRGSVLVVPDYRDLDRLEEALKRLVPAEAVARLTADNGPTPRYR
NFLRLLAGTAKIAIGTRSAAFAPVQDLGLVACWDDGDDLHIEQRAPYAHAREVLLLRAEQ
EGAACLLAGHARSTEVQRLVEAGWAVPVETERGTLRRTVARVVSTADSFEQARDPLATLA
RLPHAAWQAAKEGLERGPVLVQVARAGYAPSLVCETCRAPARCAHCQGPLALGGTSALPQ
CRWCSTPAPDWRCSHCGGRRLRKGATGVLRTAEELGRAFPGTTVITSSGDQVKARVGAGK
ALVVATVGAEPVAEGGYAAALLLDGDSLLRRETLRAGEDTVRRWFNAAALVRPAPDKGLV
VVTASDAAATGALLRWDPAGYAQRELSLRMELQLPPAVRIASVTGPRAAVEHYTGAVEAD
LARAGITLRTAGPAPLLLTAPPSGRRSAEDVRTLLFFPYGQAAAVVRVLRVTRAAVAAKR
TTDPVQLRLDGVDVL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcggcgttcccctcgcccggcgcctgccggtggcacgggtcctggttgagtcc
tccctgcctcacctggaccgcccattcgactatgccgtcccggagccgctggaccaggct
gcccagcctggaacccgggtgaaggtcaagttcaatggccaggacctcagcggattcctc
cttgagcgggttgaggagtccgacgccggacacaccttggttcccttggcgaaggttgtg
tccccggtccaggtcctcacgcccgccgtcagggaccttgccaccgccgttgctgcccgt
tacgccggtacggtcagcgatgtcctccgcttggcggtgcccccgcgggtggccaagctg
gaaaaggactaccccgactcgctgggtgcaaaggaggcgtttcctgcgcccgaagctgcc
ggaacccccgccgtttccgcctggcgtgagtaccgcacaggtgctgcgttcctgcggcac
ctggctggcgggggatcgccccgcgccgtcgtcaaccccctgcaggggtacggtcccgcg
ggctggccggacctgctggcccaggcctccgctgccgcctacacctccggtaggggctcg
gtgctggtggtacccgactaccgggacctggaccggctcgaggaagcgctcaaaaggctg
gtcccggccgaggcggtggcccggctcaccgccgacaacgggcccaccccgcggtaccgc
aatttcctccgactcttggccggcactgcgaagatcgccatcggcacaaggtccgccgcc
ttcgcgcctgttcaggacctggggctggtggcctgctgggacgacggcgacgatcttcac
atcgagcagcgcgcaccatacgcccatgcccgggaggtcctgcttctgcgggccgagcag
gaaggcgctgcctgcctgcttgcaggccatgcccgcagcaccgaagtgcagcggttggtg
gaagccggctgggccgtcccggtcgaaaccgagcgtggaaccctccgcaggaccgttgcc
cgcgtcgtcagcactgccgacagcttcgaacaggcgcgggatccactggccaccctcgcc
cgcctcccgcacgccgcgtggcaggcggccaaagaaggactggagcgcggccctgtgctg
gtgcaggtggccagggcaggctatgcgccctcgctggtatgcgaaacgtgccgtgcaccg
gctcgctgcgcccactgccagggacccctggcgctgggtggaacatcagcgctgccgcag
tgccgctggtgttccaccccggcaccggactggaggtgttcccactgtgggggcaggcgg
ctgcgcaagggcgccaccggggttctgcgcactgccgaggagcttggccgagcatttccc
ggcaccacagtcatcacgtcctccggcgaccaggtgaaggccagggtgggggcgggcaag
gcgctggtggtggccaccgtcggcgccgaacctgtcgcagagggcggttatgctgctgcc
ctgctcctggacggcgattccctgctccgccgcgaaaccctccgtgcaggagaagacacc
gtgcggcgctggttcaatgctgcagcgctggtccgtcccgccccggacaaggggctggtg
gtggttacggcctcggacgcggcagcaaccggcgccctgctgcggtgggacccggcaggt
tacgcccagcgcgagctgtccctccggatggagctgcaactgccgccggctgtgcggatt
gcttccgtgacggggccgcgggctgccgtggaacactacaccggtgccgtggaagccgac
ctcgcacgcgccggcataacgctgcgcactgcgggcccggcgccgctgctgctgactgca
ccgccctccggcaggcgctcagccgaagacgtacggaccctgctgttcttcccttacggc
caggcggccgccgtcgtccgcgtcctcagggtcacccgggcagccgtagcagccaaacgg
accaccgacccggtgcagctccgcctcgacggtgtcgacgtgctttag
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