Pseudarthrobacter defluvii: JCQ34_11250
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Entry
JCQ34_11250 CDS
T09165
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pdel
Pseudarthrobacter defluvii
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdel03036
]
JCQ34_11250 (smc)
Chromosome and associated proteins [BR:
pdel03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JCQ34_11250 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
AAA_13
DUF4201
ABC_tran
MukB
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
WJH23074
LinkDB
All DBs
Position
complement(2427549..2431136)
Genome browser
AA seq
1195 aa
AA seq
DB search
MHLKSLTVRGFKSFASATTFDFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK
MEDVIFAGTSGRPPLGRAHVSLTIDNTDGALPIEYSEVTISRTLFRTGGSEYAINGAGCR
LLDIQELLSDSGLGREMHVIVGQGQLDRVLHATPEDRRGFIEEAAGILKHRRRKERTVRK
LEAMQANLQRLTDLTGEIRRQLTPLGKQAEVARRAQRVQFDVRDARARLLADDLVQLQLA
LEQDVADEAALKARRTAVEQELEAGRRQQAAMEQLAAEATPRLNAARDTWYRLSTARERL
RSLGSLATERSRLLGSEDAAPSPGRDPEQLERQAARVRQELAELEQDIETRRSALATASA
AKAEAEQAALAEDQRLTAQLRAAADRREGLARLAGQVAAARSRVESAQAELGRLRESLTA
GTERRARAQAEFTALENQVAGVEEGEESLDADYEAASEALDAVLQEITDLKAAVNEGVRK
RDALAARLDALKLGLERKDGARHVLESRLPGVQGSVAAAITVQAGYEAAIAAALGQASEA
VLVQDKDTAVEVLQRLKDDDAGRASLLLASAAAGQPEDGPDQPLPDGAQWAAGLVNGPAE
HVALVRHLLARTAVVPGIDAAATVVDSVPGLTVVTPEGDVFTALTATGGSAKAPSLLEVQ
AAVDDAGRSLSAVTADLERNRFALAGAEARRAGAQEEADAALDKLHESDARLAAVAERLG
HLNSVLRSAVGESERMAASLARAEENVAAEQEALTAVTARLAAAQEAPVEEEPSTEQRDA
LARAASAARAAEVEARLSLRSAEEQLAATRNRVASLERAAAAERRAREEAAERARRRRIQ
AKRAAAVSAGVELALGFVDVSVDLARHERDLAEENRELRDRGLRGIREANEALARELAQL
TDNVHRDELARAQQRARIEAVETRSVDELGITPEALVEEFGPHVPVPVPAEESGDKWAAL
RAPVDAGGQEIVEGKPYVRQEQEKRLRKAERDLASLGKVNPLALEEFAALEERHQFLSSQ
LEDLKASRRDLLDIIKEVDDRVQRVFAEAFKDTQAQFTRVFDRLFPGGEGRLVLTDPADM
LTTGIEVEARPAGKKIKRLSLLSGGERSLTAVALLVAIFKARPSPFYVMDEVEAALDDTN
LGRLITIFEELRESSQLIVITHQKRTMEVADALYGVTMRGDGVSTVISQRLGAEV
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
ttgcacctcaaaagcctcaccgtccgggggttcaagtcctttgcgtctgccaccaccttc
gacttcgaacccggcgtcaccgccgtggtgggtcccaacggatccgggaagtccaacgtg
gtggacgccctggcctgggtcatgggcgagcaaggcgccaagaccctccgcggcggcaag
atggaggacgtcattttcgccgggacgtccggacggccgcccctgggacgggcccacgtt
tcgctcaccatcgacaacaccgacggcgccctgcccatcgaatacagcgaagtcaccatt
tcccggacgctgttccgtacgggcggctcggagtacgccatcaacggtgccggctgccgg
ctgctggatatccaggaactgctttccgactcagggctgggccgggagatgcacgtcatc
gtggggcagggccagctggaccgcgtgctgcacgccacccccgaggaccgccgcggcttc
attgaggaggcagcggggatcctcaagcaccgccggcgcaaggaacgaacggtccggaaa
ctggaagccatgcaggccaacctccagcgcctcaccgacctcaccggggaaatccggcgc
cagctcacgcccttgggcaagcaggcggaggtggcccgccgcgcccagcgcgtccagttc
gacgtcagggacgcccgcgcccgcctgctcgccgacgacctcgtccagctgcagctggcg
ctggagcaggacgtggcggacgaagccgcgctcaaagcccggcggaccgccgtcgaacag
gaactcgaagcgggccgcaggcagcaggcagccatggagcaacttgcggcagaggccaca
ccgcgcctgaatgccgcccgtgacacctggtaccggctctccacggcgcgggagcggctg
aggtcgctcggctcgctggccactgaacgcagccgcctgctgggttccgaagacgccgcc
ccttccccgggccgggaccccgaacagctcgaacgccaggcagcccgggtgcggcaggag
ctcgccgagcttgaacaggacatcgaaacaaggcgcagtgccctggcgacggccagcgct
gcaaaggccgaggcggagcaggcggccctggccgaggaccagcggctcaccgcccagctc
cgtgctgcagccgaccgccgggaaggactggcgcggctggccggccaggtggcggccgcc
cgatcccgggtggagtccgcgcaggcggaactgggacggctgcgcgaatcccttaccgcc
ggaacggaacgccgcgcccgtgcccaggccgagttcacggcactggagaaccaggtggcg
ggcgtggaggagggggaagaatcccttgacgccgactacgaggctgcaagcgaagccttg
gacgctgtcctccaggagatcactgacctcaaggccgccgtcaacgaaggggtccgcaaa
cgggatgccctggccgcccggctcgacgccctcaagctgggccttgagcggaaggacggc
gcccggcacgtgctggagtcccgcctcccgggggtgcagggaagcgttgccgccgcgatc
accgtgcaggccggctatgaagcggccattgccgccgcgctcgggcaggcatccgaggca
gtgctggtccaggacaaggacacggccgttgaggtgctgcagcggctcaaggacgacgac
gccgggcgggcgtcgttgctcctcgcctcggctgcggcgggccagccggaggacgggccg
gaccagccgctgcctgacggtgcgcagtgggctgccggcctcgtaaacgggcccgcggag
cacgtcgccttggtccggcacctgctggcccgaaccgccgtcgtccccgggatcgacgcc
gcggccacggtcgtggactcggtgcccggactcacggtggtcacccctgagggggacgtc
ttcacggcattaacggccaccggtggttcggccaaggcaccgtcattgctcgaggtgcag
gcggcagtggacgacgccggccgcagcctttctgcggtcaccgcggacctggagcggaac
aggttcgccctggccggcgccgaggcacggcgcgctggtgcccaggaggaagcggacgct
gccctggacaagctgcacgaatccgacgcccgcctcgccgcggtcgctgagcgcctgggc
cacctgaactccgtcctccgcagtgccgtgggggagagcgaacggatggccgcgtccttg
gcgcgggcggaggagaacgtcgctgccgagcaggaagcgctcacggccgtcaccgcccgc
ctggcggcagcccaggaagcacccgttgaagaggaaccctcaacggaacagcgcgatgcc
ctggcgcgtgccgcatccgccgcccgtgcggctgaagttgaggcacggctgtccctgcgc
agtgccgaggagcagctggcggccacccgcaaccgggttgcatcgctggaacgcgccgcc
gccgccgagcgccgtgcccgggaggaagccgcggagcgcgcccggcgccgccggatccag
gccaaacgggcagccgccgtttccgcgggcgtggaattggcactcggcttcgtggatgtc
tccgtggacctggcccggcacgaacgggacttggccgaggagaaccgcgagctgcgtgac
cgcggactgcgtggcatccgggaagctaacgaggccctggcccgggaactggcccagctc
accgacaatgtgcaccgtgatgagctggcccgggcccagcagcgggcaaggatcgaagcg
gtggaaacccgctccgtggacgagctgggcatcacccccgaggcgctggtggaggaattt
ggcccgcacgtccccgttcccgttccggcggaggaatcaggcgacaaatgggccgccctc
cgcgcccccgttgatgcgggagggcaggagatcgttgaaggtaagccctacgtccggcag
gaacaggagaagcggctgcggaaggcagaacgggacctggccagcctgggcaaggtcaac
cccctggcactcgaggaattcgcggcgctggaggagcggcaccagttcctcagctcccag
ctcgaagacctgaaggccagccgccgggacctgctggacatcatcaaggaagtggacgac
cgcgtccagcgcgtcttcgccgaagcctttaaggacacccaggcgcaattcaccagggtg
ttcgaccgcctttttcccggcggcgaaggccggctggtcctcaccgaccccgcggacatg
ctgaccaccggcatcgaagtggaggcccgtcccgcgggcaagaagatcaagcggctgtcg
ctgctctccggcggcgagcggtccctgaccgcggtggcgctgctggtggccatcttcaag
gcccggccctcgccgttctacgttatggacgaggtggaagcggcgctggatgacaccaac
ctgggccggctgatcaccatcttcgaagaactccgggaatccagtcagctcatcgtgatt
acccaccagaagcgcaccatggaagtggcggatgcgttgtacggcgtgaccatgaggggc
gacggcgtctccaccgtgatcagccagcgcctcggcgcggaggtgtag
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