Pseudarthrobacter defluvii: JCQ34_11270
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Entry
JCQ34_11270 CDS
T09165
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCQ34_11270 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdel03400
]
JCQ34_11270 (mutM)
Enzymes [BR:
pdel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JCQ34_11270 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JCQ34_11270 (mutM)
DNA repair and recombination proteins [BR:
pdel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JCQ34_11270 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
DnaJ_CXXCXGXG
HpcH_HpaI
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WJH23078
LinkDB
All DBs
Position
complement(2436050..2437018)
Genome browser
AA seq
322 aa
AA seq
DB search
MPELPEVEVVRRGLVNWVRGRTIRAVEVLDPRSIRRHALGVEDFIGNLEGATVSDVVRRG
KFLWLPLVDTAAAGLENPKTGGLPEVALMAHLGMSGQLLMQDSAVPDEKHLKVRFRLSPR
DGMPEQLRFVDQRIFGGLFVTTLVPTDDGAPGGLAESPLPLIAEEAAHIARDPLDPAFSF
DLFYQRLRKRKTGLKRALLDQGLVSGIGNIYADEALWRARLHFARATDTLRRSEAQRVLD
SAREVMLDALAAGGTSFDSLYVNVNGASGYFDRSLNAYGRQGEPCRRCAAAGINATIRRD
QFMNRSSHTCPVCQPRPRNGRW
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaggtggaggttgtccgccgtggcctggtgaactgggtccgcggc
aggacgattcgtgccgtcgaagtcctcgatccgcgttccatccgccgccatgcccttggc
gttgaggacttcatcggcaacctcgaaggtgccaccgtgtccgacgtcgtgcgccgggga
aagttcctttggctgcccctggtggacaccgctgctgccggattggagaacccgaaaacc
ggtggcctgcccgaagttgccctgatggcgcacctgggcatgagcgggcagctgctgatg
caggactcagccgtcccggatgagaagcacctcaaagtccggttccggctcagccctcgg
gacgggatgccggagcaactgcggttcgtggaccagcggattttcggcggcctcttcgtc
accacgctcgtccccacggacgacggcgctccaggcggcctggcggaatcgccccttccc
ctgattgcggaggaagcagcacacatcgcccgggaccccctggatcctgccttctccttc
gatctcttctaccagcgcctccggaagcgcaaaacggggctgaagcgggcgctgctggac
cagggcctggtgtccggcatcggcaacatctatgccgacgaagcactgtggcgcgcccgg
ctgcatttcgcccgggccaccgacacgctgcgccgcagtgaagcccagcgagtcctcgac
agcgcccgcgaggtgatgcttgatgccctggccgcaggcgggaccagcttcgattcgctg
tacgtcaacgtcaacggcgcatcaggctactttgaccggtccctcaatgcctacggccgg
cagggggagccgtgcaggcggtgcgccgcagcgggtatcaatgcgaccatccgccgggac
cagttcatgaaccgttcgtcccatacctgccccgtgtgccaaccgcggccccgcaacggc
cgctggtag
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