Pseudarthrobacter defluvii: JCQ34_12185
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Entry
JCQ34_12185 CDS
T09165
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel00521
Streptomycin biosynthesis
pdel00523
Polyketide sugar unit biosynthesis
pdel00525
Acarbose and validamycin biosynthesis
pdel00541
Biosynthesis of various nucleotide sugars
pdel01100
Metabolic pathways
pdel01110
Biosynthesis of secondary metabolites
pdel01250
Biosynthesis of nucleotide sugars
Module
pdel_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JCQ34_12185 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JCQ34_12185 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JCQ34_12185 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JCQ34_12185 (rfbB)
00525 Acarbose and validamycin biosynthesis
JCQ34_12185 (rfbB)
Enzymes [BR:
pdel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JCQ34_12185 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
Sacchrp_dh_NADP
adh_short
NmrA
KR
Fim1C-like_C
Motif
Other DBs
NCBI-ProteinID:
WJH23240
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All DBs
Position
2635945..2636943
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AA seq
332 aa
AA seq
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MQRLLVTGGAGFIGSNFVHYVLENTEDHVTVLDKLTYAGNLESLQGLPQERFNFVQGDIA
DAGTVDGLVADADVVVHYAAESHNDNSLHDPRPFLDTNIIGTYTLIEAARKHNKRFHHIS
TDEVYGDLELDDPERFTEQTPYNPSSPYSSTKAGSDLLVRAWVRSFGLQATISNCSNNYG
PYQHVEKFIPRQITNVIDGIRPKLYGKGENVRDWIHANDHSSAVLAIIAKGTVGETYLIG
ADGEKNNKEVVELILKHMGQSPDAYDHVIDRPGHDLRYAIDSTKLRNELGWEPRFSNFDE
GIENTIAWYRENEDWWRPQKAATEAKYKEQGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgacttctagtgaccggcggagccggctttatcggctcaaactttgtccactac
gttctcgaaaacaccgaagaccatgtcactgttctggacaagctgacctacgcgggcaat
cttgagtcgttgcagggccttccgcaggaacgcttcaacttcgttcagggcgacattgcg
gacgccgggactgtcgatggcctggtggccgacgccgacgtagtcgttcattatgctgct
gagtcccacaacgacaactccctccacgacccccgcccgttcctggacaccaacatcatc
ggcacctacacgctgatcgaagcagcccgcaagcacaacaagcgcttccaccacatttcg
actgacgaggtctacggagacctggaactggatgacccggagcgcttcacggagcagact
ccctacaacccgtccagtccgtactcctccaccaaagccggatctgatctcctggtgcgg
gcgtgggtgcggtccttcggcctgcaggccaccatcagcaactgctccaacaactacggt
ccgtaccagcacgtggaaaagttcattccccggcagatcaccaacgtgatcgatgggatc
cgccccaagctctacggcaagggcgagaatgtcagggactggatccatgccaatgatcat
tcctcagctgtgctggccatcatcgccaagggaaccgtcggcgaaacgtacctgatcggg
gccgacggagaaaagaacaacaaagaagttgtcgaactgatcctcaagcatatgggccag
tcccctgacgcgtacgaccacgtgatcgaccgccccggccacgacctgaggtacgcgatt
gactccaccaagcttcgcaatgagctcgggtgggagcccaggttctccaatttcgatgag
gggatcgaaaacaccatcgcgtggtaccgggaaaacgaggactggtggcgtccacaaaaa
gcggccaccgaggccaagtacaaggaacagggccagtaa
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