Pseudarthrobacter defluvii: JCQ34_12530
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Entry
JCQ34_12530 CDS
T09165
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel03420
Nucleotide excision repair
pdel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JCQ34_12530
03430 Mismatch repair
JCQ34_12530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdel03400
]
JCQ34_12530
Enzymes [BR:
pdel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCQ34_12530
DNA repair and recombination proteins [BR:
pdel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JCQ34_12530
MMR (mismatch excision repair)
Other MMR factors
JCQ34_12530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
Motif
Other DBs
NCBI-ProteinID:
WJH23293
LinkDB
All DBs
Position
complement(2719878..2722013)
Genome browser
AA seq
711 aa
AA seq
DB search
MTTENFDGSGSLEDRILGGLDDEQREVASTLNGPLCVLAGAGTGKTRAITHRIAYGVHSG
VYTPQRLLAVTFTARAAAEMRSRLRDLGAGNVQARTFHAAALRQLQFFWPQAVGGTLPNL
LDHKAQLLAEAARRLRLSTDRASIRDLASEIEWAKVSMLTPANYLENAQGRGAPGGFDLT
AVARVFQAYEDVKTDRNVIDFEDVLLITVGILQEDERVAATVREQYRHFVVDEYQDVSPL
QQRLLELWLGGRDELCVVGDASQTIYSFTGASPRHLLDFKARYPQANVVKLIRDYRSTPQ
VVKLANDLLAGRPSGGPAADAAWATPLQLVAQRPAGPAPQFTECTDDEAEAATVAQKIKA
LLDAGTPASQVAVLFRTNGQSEAYEQALAAAGIGYQLRGGERFFARKEVRDAILQLRAAT
RAVSETDTPEPLGQLVRDIVSSLGYTESAPHSGGALRERWESLAALVALADELVQNRGAQ
FGLADFVNELQERSLAQHAPTVQGVTLASLHAAKGLEWDAVFLVGLSEGLMPISFADSPE
SVDEERRLLYVGITRAREHLSLSWSTARTPGGRANRKPSRFLDGLRPDSVASSSTRGKGT
VPRRKAAAPAVCRVCGSMLATGAERKVGRCNACPPTYEEQTFDALRSWRREVAQSADVPA
FVVFTDATLTAIAEARPASLEELSGLAGVGPSKLERYGEDVLRVLAESSVL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgactacagagaattttgatggatcaggctcccttgaggaccggatccttggagggctg
gacgacgaacagcgtgaggtggccagcaccctgaacgggccgctgtgcgtgctggccggg
gcgggaaccggaaagacccgcgccatcacgcaccgcattgcctacggtgtgcactccggg
gtctacaccccgcagcgcctcctcgcagtcaccttcaccgcccgcgccgccgctgagatg
cgcagccgcctgcgggacctcggcgcgggaaatgtgcaggcacggaccttccacgcggcc
gccctgcggcagttgcagttcttttggccgcaggctgtaggcggcacgctgcccaacctg
ctggaccacaaggcccagctgcttgcggaggcggcccgccggctcaggctcagcaccgac
cgcgcatccatccgcgaccttgcctcggaaatcgagtgggccaaggtgtcaatgctgaca
cctgccaactacctggaaaacgcccaggggaggggcgcgcccggcgggttcgacctcacc
gcggtggcgcgtgtcttccaggcctatgaggacgttaagaccgaccgcaacgtgattgac
ttcgaggacgtcctgctgatcacggtgggcatcctgcaggaggacgaaagggtggccgcc
accgttcgcgaacagtaccggcacttcgtggtggacgaataccaggacgtgtcaccgctg
cagcagcggctcctggagctctggctcggcgggcgggacgaactctgcgtggtgggcgac
gccagccagaccatctattcctttaccggcgcatcgccccggcacctcctggacttcaag
gcccgctatccgcaggccaatgtagtcaagctcatcagggactaccgttcaacgccgcag
gtggtgaaactggccaatgacctgctggccggccgccccagcggagggcctgccgccgac
gcagcctgggccacgcccctgcagctcgtggcccagcgtcctgccgggcctgcaccgcag
ttcaccgagtgcacggatgatgaagcggaagccgccacagtggcgcagaagatcaaggca
ctgctcgacgccggcactccggccagccaggtggctgtccttttccgcactaacggacag
tccgaggcgtacgagcaggcactggcagcggcgggcattggctaccagcttcggggcggt
gaacgcttctttgcccgcaaggaggttcgggacgcaatcctccagctccgcgcagccacc
agggctgtgtccgaaacggatacccccgaacctctcgggcagctggtgcgcgacatcgtt
tcctccctgggctacaccgagtccgcgccgcacagtggcggcgccctgcgcgaacgctgg
gagtcgctggctgccctggtggcgctggccgatgagctcgtgcagaaccgcggagcccag
ttcggcctggcggacttcgttaacgaactccaggaacgctcgctcgcccagcacgcgccc
accgtgcagggcgtcacgcttgcctccctccatgccgccaagggcctggaatgggatgcc
gtcttcctggtgggccttagcgaagggctgatgcctatttccttcgccgattcgcccgaa
tcggtggatgaagaacgccgcctgctgtatgtcgggatcacccgtgcccgcgaacacctg
tccctctcatggagcacggcaaggacccccgggggccgggccaaccgcaagccgtcccgg
ttccttgacggcctgcggcctgactcggtagcaagctcaagtacccgggggaagggaacg
gtgccccgccgcaaggctgccgcccccgccgtctgccgggtctgcggcagcatgcttgcc
accggagctgaacggaaggtgggacgctgcaacgcgtgcccgcccacctacgaggaacag
accttcgacgccctccgcagctggcgccgggaagtggcgcagtccgcggacgttccggcg
ttcgtggtgttcaccgatgccaccctcacggccatagccgaggcgcggccggcgtcgctg
gaggagctgtccgggctcgccggcgtgggtccctccaagctggagaggtacggggaagac
gtcctccgggtactggctgaaagctccgtcctgtga
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