Pseudarthrobacter defluvii: JCQ34_12560
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Entry
JCQ34_12560 CDS
T09165
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel03030
DNA replication
pdel03430
Mismatch repair
pdel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCQ34_12560
03430 Mismatch repair
JCQ34_12560
03440 Homologous recombination
JCQ34_12560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdel03032
]
JCQ34_12560
03400 DNA repair and recombination proteins [BR:
pdel03400
]
JCQ34_12560
Enzymes [BR:
pdel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCQ34_12560
DNA replication proteins [BR:
pdel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCQ34_12560
DNA repair and recombination proteins [BR:
pdel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCQ34_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WJH23299
LinkDB
All DBs
Position
2732038..2732748
Genome browser
AA seq
236 aa
AA seq
DB search
MSSWNTLPRAAFDLETTGRNSRAARIVTASITVVDHEGKVITEHEWLADPGVEIPTEASD
VHGITTEQARRDGRPAHEVTREVAGVLQELFDSGTPVIAFNASYDFTVLAAESARYGIPQ
LTRFPVLDPYIMNKQVDRYRKGKRTLTALCEEYGVVLDNAHTSAADALATLRVLDAMAGK
FPKLMMPASQLHQLQVDWAVSQAADFQGYLRKTKPAAVIEGDWPVLPPQDATAGGF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctggaacacgctcccccgcgcagccttcgatcttgagaccaccggccgcaat
tcaagggcggcacgaatcgtcacggcatccatcaccgtggtggatcacgaaggcaaggtc
attaccgagcacgagtggctggccgatccgggcgttgaaattcccaccgaggcaagcgac
gtccacggcatcaccacggagcaggcaaggcgggacgggcggcccgcgcacgaggtcacg
cgggaagtggcgggcgtcctccaggagctctttgattccggaaccccggtgatcgccttc
aacgccagctatgatttcacggtccttgccgccgagtcggcccgctacgggatcccgcag
ctcacccgcttccccgtcctggacccgtacatcatgaacaaacaggttgacaggtaccgc
aagggcaaacgcacactcaccgcgctttgcgaggagtacggagtggtcctggacaatgcc
cacacgtcggctgccgatgccctggcaaccctccgcgtccttgatgcgatggcgggaaag
tttcccaagctgatgatgcccgccagccagctgcaccagctgcaggtggactgggcggtg
agccaggcggcggacttccaggggtatcttcgaaagaccaagcccgcggccgtaatcgag
ggagactggcccgtacttccgccgcaggacgccacggctggaggcttctag
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