Pseudarthrobacter defluvii: JCQ34_16765
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Entry
JCQ34_16765 CDS
T09165
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel00040
Pentose and glucuronate interconversions
pdel01100
Metabolic pathways
pdel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JCQ34_16765
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JCQ34_16765
Enzymes [BR:
pdel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
JCQ34_16765
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WJH24050
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Position
3597877..3599247
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AA seq
456 aa
AA seq
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MRKRHAHLSLAAAMAVAGALIIPTQAWAAPNPAADPAAQTAQTPLERQILAPRDGWAAEG
PGTTGGSTASAAHVYDVHNKAEMLAAFAEAGTQPKIVRVHGTINANTAADGSPLTCQDYA
QGTGYSLEQYLTDFDPATYGRDQEPAGPQEAARRLAAAKQAKTIRWDIPSNTTIVGATPD
SSITGAAMRINGATNVIVRNLTLRDSADCFPAWDPTDGAEGNWNSEYDLLQVINKATHVW
IDHSSFTDAPNLDSSQPLYFGRPYQVHDGAVDVTNGSDLVTMSYNRFSDHDKLLLIGSTD
SATRGDPGKLRVTIHHNVFENVGQRAPRVRFGQVDVYNNHYKVAADSPIPYEYSLGAGFS
SHLYAEANAFTLPHGITAADIIGRYKGTEITTIGNAVNGKITDIRAEYNAAAAPADQLAA
DTSWAPAFRTQVHPAQAVPALLQNSTGPIFTSGADS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaacgccatgcccacctgtctttagccgcagcaatggcagtagccggcgccctc
atcattccaacccaggcatgggcggctccaaaccctgctgccgaccccgcagcccagacg
gcgcagacaccactggaacgccagatcctcgctccgcgcgatggctgggcggccgaggga
ccaggaaccaccggcggttcaacagcatcagctgcccatgtatacgacgtgcacaacaag
gccgaaatgctggcggccttcgcggaagccggtacccagccgaagatcgtccgtgtccac
ggaaccatcaacgcgaacacggcagcggatggttcacccctgacctgccaggactacgca
cagggcaccgggtacagcctggagcagtacctgaccgacttcgaccccgcgacctacggc
cgcgaccaggagcccgcgggcccgcaagaggccgcccgccgactggccgccgccaagcag
gcgaaaaccatccgctgggacatccccagcaacaccaccatcgtaggagccactccggac
agcagcatcacgggcgcggcgatgcgcatcaacggtgccaccaacgtgatcgtccgcaac
ctcacactgcgggactccgccgactgcttccccgcttgggaccccacagacggggccgaa
ggcaactggaacagcgaatacgacctgctgcaggtcatcaacaaagccacgcatgtctgg
atcgaccactcctcgttcacggacgccccgaacctggacagctcgcagccactctacttc
ggccgcccctaccaggtgcacgacggggcagtggatgtcaccaacggttcggacctggtg
accatgtcctacaaccgcttctccgaccacgacaagctgctcctgatcggctccaccgac
tcagccacgcggggcgacccgggcaagctccgggtgaccatccaccacaacgtcttcgag
aacgtgggccagcgcgctcctcgggtccgctttggccaggtggacgtctacaacaaccac
tacaaggtagcggcggacagccccatcccctacgagtacagcctcggcgccggcttcagc
tcccatctgtatgcggaagccaacgccttcaccctgccgcacgggatcaccgccgcggac
attatcggccgctataagggaaccgagatcaccaccatcggcaatgctgtgaacggcaag
atcactgacattcgtgctgagtacaacgccgctgccgcgcccgcagaccagctggcagca
gacacctcctgggcacccgccttccgcacccaagtccacccggcccaggctgtgccggcc
ctgctgcagaactccaccggccccatctttacctcgggggccgactcctga
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