Pseudarthrobacter defluvii: JCQ34_18310
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Entry
JCQ34_18310 CDS
T09165
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pdel
Pseudarthrobacter defluvii
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdel03400
]
JCQ34_18310
DNA repair and recombination proteins [BR:
pdel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
JCQ34_18310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
TrwB_AAD_bind
AAA_16
ResIII
T2SSE
AAA_30
AAA_7
AAA_10
CbiA
Zeta_toxin
P-loop_TraG
AAA_19
Isochorismatase
AAA_6
Motif
Other DBs
NCBI-ProteinID:
WJH24329
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Position
3945113..3946912
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AA seq
599 aa
AA seq
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MATKTTAEKLATIQKGYTLEGATIELGAAIIDGELHKDAPVRLPLAMMNRHGLVAGATGT
GKTVTLHMMAEQLSTAGVPVFLADIKGDLSGLATAAVGSDKLKARTDSIGQPWEGKTFPV
EFLALGGDGNGVPVRATVTSFGPILLSRIMELNDTQESSLQLVFYFADKNGLELIDLKDL
RAVIQFLTSDEGKDKLAELGGLSKATAGVILREIVNLEAQGLEKFFGEPEFDTAELLRTA
PDGRGVVTCLELPTLQTKPMLFSTFLMWLLADLFEDLPEAGDLDKPKLVFFLDEAHLLFN
GATKAFLDAITTTVRLIRSKGVGIFFVTQTPKDVPADVLGQLANRVQHALRAFTPEDAKA
LKATVSTFPVSDYDLEETLTSAGIGEAVITVMNEKGAPTPVALTRLRAPESLMGPSEDAL
VRSTVAGSALLGKYGTAVDNPSAYEKLNGKAAAPTGPAAEPVGTPSAGAPAAGTPAAPGS
YDVDAEARRIEEEILGRPSSRPPQATEPVSQDFDVQYGTPDYSEPRESKPRAKAPRTRKP
ASQPSQPQPEPGGMMGDLGGVLGGALGGGLKSMARSMGTQLGRELLRGVFGTSSRRRRR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaaaccacagcagagaagcttgccaccatccagaagggctacaccttggag
ggcgccaccatcgagctgggagccgccatcatcgacggcgaactccacaaggacgcgccg
gtgcggctgccgctggccatgatgaaccggcacgggctggtggccggcgccaccggaacc
ggcaagaccgtcacgctgcacatgatggccgaacagctgtccacggccggcgtccccgtg
ttcctggccgacatcaaaggcgacctttccggcctggcgacggccgccgtcggcagcgac
aaactcaaggcccgcacggacagcatcgggcagccgtgggagggcaagacgttccccgtg
gagttcctggcgctcggaggcgacggcaacggtgtcccggtccgcgccaccgttacgtcg
ttcgggcccatcctgctctcgcggatcatggagctgaacgacactcaggaatccagcctg
cagctggtgttctacttcgcggacaaaaacggcctggagctgatcgacctcaaggacctg
cgcgccgttatccagttcctcacctcggacgagggcaaggacaaactggcggaactcggt
gggctgtccaaggcgacagcgggcgtgatcctgcgggagatcgtgaacctggaggcgcag
gggctggagaagttcttcggcgagccggagttcgataccgcggagctgctgcgcaccgca
ccggacggccgcggtgtggtcacctgcctggagctgcccaccctgcagaccaagcccatg
ctgttctccaccttcctgatgtggctgctcgccgacctgttcgaggacctccccgaggcc
ggcgacctggacaagcccaagctcgtcttcttcctggacgaggcacacctgctgttcaac
ggcgccaccaaggcgttcctggacgccatcaccaccaccgtccggctcatccggtccaag
ggcgtaggcattttcttcgtcacccagaccccgaaggacgttcccgccgacgtcctgggc
cagctggccaaccgggtgcagcacgccctgcgcgcattcacccctgaggacgccaaggct
ctgaaggccacggtgtccacgttcccggtgagcgactacgacctggaagagaccctgacc
tctgcaggtatcggggaggccgtcatcaccgtcatgaatgaaaaaggtgcgcccacgccc
gtggccctcacccggctgcgggcaccggaatccctcatgggccccagcgaggacgctttg
gtgcgcagcacggttgccgggtccgcgttgctgggcaagtacgggactgcggtggacaac
ccgtccgcgtacgagaagctgaacggcaaggctgcggcgcccaccggtccggcagcggag
cctgttgggacgccttctgccggtgctcctgctgccggtactccagctgcgccgggctcc
tatgacgtggacgccgaagcccggcgcatcgaggaggagatcctgggccggcccagcagc
aggccgccgcaggccacggagcccgtgtcacaggatttcgacgtccagtacggcacgccc
gattacagcgagccacgtgagtccaagccgcgggccaaggctccgcggacccgaaagcca
gcgtcccagcccagtcagccacagccggagcccggcggcatgatgggtgacctgggcggg
gtcctcggtggcgccctgggcggcgggctgaagagcatggcgcggtccatgggtacccag
ctgggccgcgaactgctccgcggagtgttcggcacctcgtcccgccgccgtcgtcgctga
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