Pseudomonas denitrificans (nom. rej.): F1C79_02105
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Entry
F1C79_02105 CDS
T09478
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pden03009
]
F1C79_02105
Enzymes [BR:
pden01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
F1C79_02105
Ribosome biogenesis [BR:
pden03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F1C79_02105
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QEY70547
UniProt:
A0A9X7MVM4
LinkDB
All DBs
Position
407999..409429
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AA seq
476 aa
AA seq
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MTDTHENLEELTPAPAGEKLQKVLARMGVGSRRDVEAWIEEGRVKVNGAVATLGQRVGDR
DAIAVDDRLLKREKIEEHVRRVLIYNKPEGEVCTRDDPEGRPTVFDRLPRLRSGRWINVG
RLDINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDEEMIERLKAGVMLEDGPA
KFSDIQEAPGGEGFNHWYHVVVMEGRNREVRRLWESQGVVVSRLKRVRFGPVFLTSELTM
GRYREMGQRELDILSEEVGLTPIALPAVSTKTKEKVERQERKLGKKLAPSERPGRGSRTR
TERAEGERPQRAPRPAAGERPARAPRDSDERPARAPRDAGDRPARAPRGDSADSRAPRKP
RDAGGDRPARAPRDAGDRPARGPRSDAGEGRAPRKPRDAGGDRPARAPRDGADRPARGPR
SDAGEGRAPRKAPSDRPAREKGAPLAERPGKPVARKPIAKRRPQAAGDGMRPGFKR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacgcacgaaaaccttgaagaacttaccccagccccggccggcgagaaactg
cagaaagtcctcgcccgcatgggcgtcggctcgcgccgcgacgtcgaagcctggatcgaa
gaaggccgcgtcaaggtcaatggcgccgtggccaccctcggccagcgcgtaggcgaccgc
gatgccatcgccgtcgatgaccgcctgctcaagcgcgagaagatcgaagagcacgtccgt
cgcgtgctgatctacaacaagcccgaaggcgaagtctgcacccgcgacgatccggaaggc
cgcccgaccgtgttcgaccgcctgccgcgcctgcgcagtggccgctggatcaacgtcggc
cgcctggacatcaacaccaccggcctgctgatgttcaccaccgacggtgagctggccaac
cgcctgatgcacccgtcctacgaaatggaccgcgagtacgccgtgcgcgtgcgtggcgaa
gtcgacgaagagatgatcgagcgcctgaaagccggcgtgatgctcgaagacggcccggcc
aagttcagcgacatccaggaagcgccgggtggcgaaggcttcaaccactggtaccacgtg
gtggtgatggaaggccgtaaccgcgaagtccgccgcctgtgggaatcccagggcgtggtg
gtcagccgcctgaagcgcgtgcgcttcggaccggtcttcctgacctccgagctgaccatg
ggccgctaccgcgagatgggccagcgcgagctggacatcctcagcgaggaagtcggcctg
acgccgatcgccctgccggcggtctccaccaagaccaaggaaaaggtcgagcgccaggag
cgcaagctcggcaagaagctggcgcccagcgagcgtccgggccgtggctcgcgtacccgc
accgagcgcgccgaaggcgagcgtccgcagcgtgctccgcgtccggctgctggtgagcgt
ccggcccgtgctccgcgcgattcggacgagcgtccggctcgcgctccgcgtgatgcaggc
gaccgtccggcgcgcgccccgcgtggtgattccgccgacagccgcgccccgcgcaagccg
cgtgacgccggtggtgatcgtcctgctcgtgctccgcgcgatgcgggtgatcgcccggct
cgtggcccgcgcagcgatgctggtgaaggccgcgctccgcgcaaaccgcgtgacgctggt
ggcgatcgtcctgctcgcgctccgcgtgacggcgccgatcgtccggcccgtggtccgcgc
agcgatgccggcgaaggccgcgcaccgcgcaaggcgccgagcgaccgcccggctcgcgag
aaaggcgccccgctggccgagcgtcccggcaagccagtcgcccgcaagccgatcgccaag
cgtcgtccgcaagctgccggtgacggcatgcgtccgggcttcaagcgctaa
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