Pseudomonas denitrificans (nom. rej.): F1C79_02470 Help Entry F1C79_02470       CDS       T09478                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pden  Pseudomonas denitrificans (nom. rej.) Brite KEGG Orthology (KO) [BR:pden00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pden03400]     F1C79_02470 Enzymes [BR:pden01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      F1C79_02470     5.6.2.6  RNA 3'-5' helicase      F1C79_02470 DNA repair and recombination proteins [BR:pden03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     F1C79_02470 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 PhoH AAA_25 Motif Other DBs NCBI-ProteinID:  QEY70608 UniProt:  A0A9X7MWB7 LinkDB All DBs Position 492189..496505 Genome browser AA seq 1438 aa AA seqDB search MTAPRTSSRARRADVLSAFHPAVAGWFRAHFAAPTQAQVEAWPAIQAGESTLVAAPTGSG KTLTAFLSAIDALVREGLANGGTLPDRTSVVYVSPLKALSNDIRINLEEPLAGIRSALLE MGLPEVDIRTAVRTGDTTSSEREAMRRQVPHILVTTPESLYVLLGSDSGRAMLAGARSVI VDEIHALAASKRGSHLALSLERLQALCEAPLVRIGLSATQKPIEAVAGFLVGRHQTCRIV DIGYSRERDLNLEVPAAPLEAVMSHDVWDKVYDRLAELASEHRTTLVFVNTRRLSERITR HLAERIGAGWVAAHHGSLSKELRLGAERRLKAGQLKVLVATASLELGIDIGDVELVCQIG SPRSIAAFLQRVGRSGHSVGGTPKGRLFPTSRDDLIECVALLDSVRQNELDALTIPHAPL DVLAQQIVAEVACQEWREDALFELFTAAQPYADLSREHFDAMLRTLAEGYTSRNGQRGAY LHRDAVHQRLRGRRGAKLTAVTSGGTIPDTGDYAVLLEPQGLSVGTVNEDFAVESLAGDV FQLGNISYRILRVEPGRVRVEDAQGQPPNIPFWLGEAPGRTDELSTSVARLRGQLDELLA QGENDPEPLARAIDWLQGLLGLNDAAARQLVEYLARARHALGALPTQKTLILERFFDESG GMQLVIHSPYGSRINRAWGLALRKRFCRTFNFELQAAATEDAIILSLSTSHSFPLDEVWR YLHSNSGEHVLIQALLDAPLFGVRWRWNATTALALPRYSGGRKVAPQLQRMRSEDLLASV FPDQVACLENIVGEREIPDHPLVAQTLDDCLHEAMDCEGWLDLLRRMERGAVTLLARDLP APSPLAAEVLSASPYSFLDDAPLEERRTQAVQSRRWTDPESADDLGALDADAIDAVRAEA WPEARDGDEMHEALTGLGGIRESEAQANEGWPFLLKSLAKAGRATRLELPAGAVWVAAER LSQWLSLHPQVAMKPSLDLPAALCEPCAVDEAQVELVRARLTGFGPRLLRELADDLGISS GDTGFALASLEREGYVLRGRFTPGASEEEWCERHLLARIHRYTVKRLRREIEPVARADFM RFLFDWQRVSAGSRVRGAESLAGVLSQLEGFQAAASAWESDILPSRVADYGINWLDDLCR AGRIVWARLPGRAAVKGRGGPLKSTPIVLLPRTQMAQWSALSAGQAGAELSAKASKVLEV LKEHGASFFEELASDSHLLRTELETVLGELVAAGRVNADSFAGLRALLMPAARRHPQRRS RTPLFGMADAGRWALLRRATLEPGTRLPAEVLEHVAMTLLRRYGVVCWRLLDREADWLPP WRDLLRVYHRLEARGEIRGGRFVAGLTGEQFALPEAVGLLREVRRREASGEWVVVSAVDP LNLAGTLLPGRKVPAVSGNRVLYRDGVPVGALIAGEVELLAELPPDDQARARELLIRR NT seq 4317 nt NT seq  +upstreamnt  +downstreamnt atgactgctcctcgaacttcctcccgcgccaggcgcgccgatgtgctgtccgctttccac ccggcggtggccggctggttccgtgcgcacttcgcggcaccgacgcaggcgcaagtcgag gcgtggccggcaatccaggcaggcgaatcgaccctggtggcggcgcccaccggttcgggg aagacgctcacggcctttctctcggccatcgatgcactggtccgcgaggggctggcgaac ggcgggacactgccggatcgcacctcggtggtctacgtttcgccgctcaaggcgctgtcc aacgacatccgcatcaacctcgaggagcccctggccggcatccgctcggcgctgctggaa atgggcctgccggaggtggatatccgcacggcggtgcgcaccggcgacaccacttccagt gagcgcgaggccatgcgccggcaggtgccgcacatcctcgtcaccacacccgaatcgctc tatgtgctgctcggctcggattccggccgcgccatgctcgccggcgcgcgcagcgtgata gtcgatgaaatccacgcgctggccgcgagcaagcgtggcagccatctggcgctgtcactg gagcgtttgcaggctttgtgcgaagcgccgttggtgcgcatcggcctgtccgccacgcag aagcccatcgaggcagtggcgggcttcctggtagggcgccaccagacctgccgcatcgtc gacatcggctacagccgcgagcgcgacctgaacctggaagtgcccgcagcgccgctggag gcggtgatgtcccacgatgtctgggacaaggtctacgaccgcctcgccgagctggccagc gagcaccgcaccacgctggtgttcgtcaacacccggcggctgtccgagcgcatcacccgg cacctcgccgagcgcatcggcgccggctgggtcgcggcgcaccacggcagcctgtccaag gaacttcgcctgggcgccgaacggcggctcaaggccgggcaactgaaggtgctggtggcc accgcgtcgctggagctgggcatcgatatcggcgacgtcgagctggtctgccagatcggc tcgccgcgttccatcgccgcctttctgcagcgggtcggccgctccggccacagcgttggc ggcacgcccaaggggcggctgttccccacttcgcgggatgacctgatcgaatgcgtggcg ttgctcgacagcgtgcggcagaacgagctggatgccctgaccatcccccacgctccgctg gacgtgttggcccagcagatagtcgccgaagtggcctgccaggaatggcgcgaggacgcg ctgttcgaactgttcactgccgcacaaccttacgccgacctcagccgcgagcacttcgac gccatgctgcgtaccctcgccgagggctacaccagccgcaacggtcagcgcggcgcttac ctgcaccgtgatgccgtgcaccagcgcctgcgtggccggcgcggagccaagctcaccgcc gtgacctccggtggcaccattcccgacaccggcgactacgccgtgctgctggagccgcag ggcctcagcgtgggtacggtgaacgaggacttcgcggtggagagcctggccggcgatgtg ttccagctgggcaatatctcctaccgcatcctgcgcgtggagccaggccgcgtgcgcgtc gaagacgcccagggccagccaccgaacattcccttctggctcggcgaggcgccaggacgc accgatgagctgtccaccagtgtcgctcgcctgcgcgggcagctggacgagttgctcgcc cagggcgagaacgaccctgaaccgctggcacgggccatcgactggctgcaggggctgctc ggcctgaacgacgccgcggcgcggcagctggtggagtacctggcccgcgcacgccacgcc ctcggcgcgttgccgacgcagaagacgctgatcctcgaacgcttcttcgatgaatccggc ggcatgcagttggtcatccattcgccttacggcagccgtatcaaccgcgcctggggcctg gccttgcgcaagcgcttctgccgcaccttcaacttcgagctgcaggctgcggccacggaa gacgcgatcatcctctcgctgtccaccagccacagcttcccgctggacgaggtgtggcgc tacctgcactccaacagcggcgaacatgtgctgatccaggcgctgctcgacgcgccgctg ttcggcgtgcgctggcgctggaacgccaccaccgctctggccttgccgcgctacagcggc gggcggaaagtcgccccgcagttgcagcgcatgcgcagcgaggacctgctggcctcggtg ttccccgaccaggtcgcgtgcctggagaacatcgtcggcgagcgcgagatccccgatcat ccgctggtggctcagaccctcgacgactgcctgcacgaggcgatggactgtgaaggctgg ctggacctgctgcggcgcatggaacgcggagcggtgaccctgctggcgcgtgacctgcca gcaccatcgccgctggcggcggaggtgctgtccgccagcccttattccttcctcgatgac gcaccgctggaagagcgccgcacccaggccgtgcagagccggcgctggaccgacccggaa agcgccgacgacctcggcgcgctggatgccgatgccatcgacgcggtacgcgccgaggcc tggcccgaagcccgcgacggcgacgagatgcacgaggcattgaccggtctgggtggcatc cgcgaaagcgaggcgcaggccaacgagggctggccattcctgctcaagtcactggccaaa gcggggagggcaacgcgtctggagctgcccgcaggcgccgtctgggtggcggcggaacgg ctcagccaatggctctcgctgcatccgcaggtcgcgatgaagccttcgctcgatctgcct gcggcgctctgcgagccctgtgcggtggacgaagcgcaggtcgaactggtgcgggcgcgc ctgaccggcttcggcccgcgcctgctgcgcgagctggcggatgacctgggcatttcctcc ggcgatactggcttcgccctggccagcctggagcgcgagggctacgtgctgcgcggtcgc ttcacgccgggcgcgagcgaggaggaatggtgcgagcgccacctgctggcgcgtatccac cgttacacggtcaagcgcctgcgccgggagatcgaaccggtggcgcgggcggatttcatg cgcttcctgttcgactggcagcgagtgtccgctggatcgagggtgcgcggtgctgaatcc ctggccggcgtacttagccagctggaaggcttccaggctgctgccagtgcctgggaaagc gacatcctgcccagccgcgtggccgactacggcatcaactggctggatgacctgtgccgc gccggtcgcatcgtctgggcgcgcttgccgggccgcgccgctgtaaaggggcgcggcggc ccgctgaagagcactcccattgtgctgctgccccgcacgcagatggcgcagtggagcgcg ttgagcgcggggcaggcgggtgccgagctgtccgccaaggccagcaaggtgctggaggtg ctcaaggagcacggcgcgtccttcttcgaggaactggccagcgacagccacctgctgcgc accgagctggaaaccgtgctgggcgagctggtggctgccgggcgggtgaatgccgacagc ttcgccggcctgcgcgccctgctgatgccggcggctcggcggcacccgcagcgtcgttcg cgcacgccgctgttcggcatggccgatgccgggcgctgggcgctgctgcgccgcgccacg ctggaaccaggaacgcggttgccggcggaggtgctcgagcacgtcgccatgaccctgctg cgccgctacggcgtggtctgctggcgcctgctcgaccgcgaagccgactggctgccgccg tggcgcgacctgctgcgggtctaccaccgcctggaagcgcgcggggaaatccgcggcggg cgcttcgttgccgggctgaccggtgagcagttcgccttgcctgaagccgtcggcctgttg cgtgaagtgcgtcgccgggaagcaagcggcgaatgggtggtggtgtcggcggtcgacccg ctgaacctggctggcaccctgctgccggggcgcaaggtgccggccgtgagcggcaaccgc gtgctctatcgcgatggcgtgccggtgggcgcgctgatcgccggcgaggtggagctgctc gcggagctgccgccagacgaccaggcccgcgcgcgggagctgctgatccgccggtaa

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