KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_02935
Entry
F1C79_02935       CDS       T09478                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Pathway
pden00300  Lysine biosynthesis
pden00470  D-Amino acid metabolism
pden01100  Metabolic pathways
pden01110  Biosynthesis of secondary metabolites
pden01120  Microbial metabolism in diverse environments
pden01230  Biosynthesis of amino acids
Module
pden_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pden00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    F1C79_02935 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    F1C79_02935 (dapF)
Enzymes [BR:pden01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     F1C79_02935 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: QEY70691
UniProt: A0A9X7MX38
LinkDB
Position
complement(595788..596624)
AA seq 278 aa
MNFVKYQALGNDYLVYASDAPFALTAAQIGRVCDRHHGIGSDGILVANHSDAAFGLRILN
PDGSEAEKSGNGLRIFSRYLWDCGLVAGQPFDIVTAGGTVTSQVSDEGRTVEVSMGRAEF
ACAKIPVLIDAPEALDFALEVDGVALKINAVSMGNPHCVVFVEQTSRELACRLGPLLENH
PLFPRRTNVQFVQWLSRDALRVEIWERGAGYTLSSGTSSCAAAAVARRLGLRDGHIDLHL
AGGLLKIRVEDDFQVTMRGAVQRVAGIDLDPEAFADLG
NT seq 837 nt   +upstreamnt  +downstreamnt
atgaacttcgtgaaataccaggccctgggcaacgactacctcgtctatgccagcgacgca
ccttttgccctgaccgctgcgcagatcggccgcgtctgcgaccgccaccacggcatcggc
tccgacggcatcctggtggcgaaccacagcgacgccgcctttggcctgcgcatcctcaac
cccgacggctccgaggcggagaaaagcggcaacggcctgcgcatcttctcccgctacctg
tgggactgcgggctggtcgccgggcagccgttcgacatcgtcaccgccggcggcaccgtc
accagccaggtgtccgacgagggccgcaccgtggaggtgtccatggggcgcgccgagttc
gcctgcgcgaagatcccggtgctgatcgatgctcccgaggcgctggactttgcgctggaa
gtcgacggcgtggcgctgaagatcaacgccgtctccatgggcaacccgcactgcgtggtg
ttcgtcgaacagaccagccgcgagctggcctgccgcctcggcccgctgctggaaaaccac
ccgctgttcccccgccgcaccaacgtgcagttcgtccagtggctatcccgcgatgcgctg
cgcgtggaaatctgggagcgcggcgccggctacacgctgtcctcgggcaccagcagctgc
gccgccgctgcggtggcgcgccggctcggcctgcgtgacgggcacatcgacctgcacctg
gccggcggcctgctgaaaatccgcgtcgaagacgacttccaggtgaccatgcgcggcgcc
gtacagcgggtcgccggcatcgacctggacccggaagccttcgccgacctcggctga

DBGET integrated database retrieval system