KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_04430
Entry
F1C79_04430       CDS       T09478                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Pathway
pden00010  Glycolysis / Gluconeogenesis
pden00020  Citrate cycle (TCA cycle)
pden00260  Glycine, serine and threonine metabolism
pden00280  Valine, leucine and isoleucine degradation
pden00310  Lysine degradation
pden00380  Tryptophan metabolism
pden00620  Pyruvate metabolism
pden00630  Glyoxylate and dicarboxylate metabolism
pden00640  Propanoate metabolism
pden00670  One carbon pool by folate
pden00785  Lipoic acid metabolism
pden01100  Metabolic pathways
pden01110  Biosynthesis of secondary metabolites
pden01120  Microbial metabolism in diverse environments
pden01200  Carbon metabolism
pden01210  2-Oxocarboxylic acid metabolism
pden01240  Biosynthesis of cofactors
Module
pden_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pden_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pden_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pden_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:pden00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    F1C79_04430 (lpdA)
   00020 Citrate cycle (TCA cycle)
    F1C79_04430 (lpdA)
   00620 Pyruvate metabolism
    F1C79_04430 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    F1C79_04430 (lpdA)
   00640 Propanoate metabolism
    F1C79_04430 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    F1C79_04430 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    F1C79_04430 (lpdA)
   00310 Lysine degradation
    F1C79_04430 (lpdA)
   00380 Tryptophan metabolism
    F1C79_04430 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    F1C79_04430 (lpdA)
   00670 One carbon pool by folate
    F1C79_04430 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pden04147]
    F1C79_04430 (lpdA)
Enzymes [BR:pden01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     F1C79_04430 (lpdA)
Exosome [BR:pden04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   F1C79_04430 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 HI0933_like NAD_binding_8 GIDA AlaDh_PNT_C FAD_binding_2 Lys_Orn_oxgnase Thi4 Lycopene_cycl DAO FAD_binding_3
Other DBs
NCBI-ProteinID: QEY70949
UniProt: A0A9X7MX36
LinkDB
Position
complement(922969..924369)
AA seq 466 aa
MSAYDVIVIGGGPGGYNAAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELY
EAAAGGEFANLGIQVKPKLDLAQMMKQKAESVTALTKGVEFLFRKNKVDWVKGWGRIDGP
GKVEVTGAEGSKTTLTAKDIIIATGSEPSPLPGVEVDNKRILDSTGALSIPEVPKHLVVI
GAGVIGLELGSVWRRLGAEVTVIEYLDRICPGMDLETARTFQRALTKQGMSFKLGSKVTQ
AKVSGKQVTLSVEPAAGGAAESIQADYVLLAIGRRPYTQGLGLESVGLTTDKRGMLENHE
HRSSVPGIWVIGDVTSGPMLAHKAEDEAIACVELIAGKAGEVNYEVIPSVIYTHPEVATV
GRTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFVKVLADERSDEILGVHMIGPNVGD
MIAEYCVAMEFRGAAEDIARTCHPHPTRSEALRQAAMNVDGWAMQA
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgagcgcatacgatgtgatcgtcattggcggcggccccggtggctacaacgctgcgatt
cgcgcgggccagctgggcctgaaagtcgcctgcgtggagggtcgcgaaaccctcggcggc
acctgcctgaacgtcggctgcatgccgtccaaagcgctgctgcatgcatccgagctgtat
gaagcggcggccggcggcgagttcgccaaccttggcatccaggtcaagcccaagctggac
ctggcgcagatgatgaagcagaaggccgagagcgtgaccgcgctgaccaagggcgtggaa
ttcctgttccgcaagaacaaggtggactgggtgaagggctggggccgcatcgacgggccg
ggcaaggtcgaggtgaccggcgctgaaggcagcaagaccacgctgaccgccaaggacatc
atcatcgccaccggctcggagccctccccgctgccgggcgtcgaggtcgacaacaagcgc
atcctcgattccaccggcgcgctgtccatccccgaggtgcccaagcacctggtggtgatc
ggcgccggcgtcatcggcctggagctgggctcggtgtggcgccgcctgggcgcggaagtc
acggtgatcgaatacctcgaccgcatctgccccggcatggacctggaaaccgccaggacc
ttccagcgcgcactgaccaagcagggcatgagcttcaagctgggctcgaaggtcacccag
gccaaggtcagcggcaagcaggtgaccctgagcgtggagccggccgccggcggcgcggcg
gagtcgatccaggccgattacgtcctgctcgccatcggccgccgcccctatacccagggc
ctcgggctggagagcgtggggcttacgaccgacaagcgcggcatgctggagaaccacgag
caccgcagcagcgtgccgggcatctgggtgatcggcgacgtcacctccggcccgatgctc
gcgcacaaggccgaggacgaggccatcgcctgcgtcgaactgatcgccggcaaggccggg
gaagtgaactacgaggtgatccccagcgtgatctacacccacccggaagtcgccaccgtg
ggcaggaccgaggaacagctcaaggccgagggccgcgcctacaaggtgggcaagttcccc
ttcaccgccaacagccgggcgaagatcaaccacgagacagagggcttcgtgaaggtgctg
gcggacgagcgcagcgacgagatcctcggcgtccacatgatcggcccgaacgtcggcgac
atgatcgcggagtactgcgtggcgatggaattccgcggcgccgccgaggacatcgcccgc
acctgtcacccgcatccgacccgttccgaggcgctgcgccaggcggcgatgaacgtggac
ggctgggccatgcaggcctga

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