Pseudomonas denitrificans (nom. rej.): F1C79_05190
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Entry
F1C79_05190 CDS
T09478
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00010
Glycolysis / Gluconeogenesis
pden00020
Citrate cycle (TCA cycle)
pden00260
Glycine, serine and threonine metabolism
pden00280
Valine, leucine and isoleucine degradation
pden00310
Lysine degradation
pden00380
Tryptophan metabolism
pden00620
Pyruvate metabolism
pden00630
Glyoxylate and dicarboxylate metabolism
pden00640
Propanoate metabolism
pden00670
One carbon pool by folate
pden00785
Lipoic acid metabolism
pden01100
Metabolic pathways
pden01110
Biosynthesis of secondary metabolites
pden01120
Microbial metabolism in diverse environments
pden01200
Carbon metabolism
pden01210
2-Oxocarboxylic acid metabolism
pden01240
Biosynthesis of cofactors
Module
pden_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pden_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pden_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pden_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
F1C79_05190 (lpdA)
00020 Citrate cycle (TCA cycle)
F1C79_05190 (lpdA)
00620 Pyruvate metabolism
F1C79_05190 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
F1C79_05190 (lpdA)
00640 Propanoate metabolism
F1C79_05190 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F1C79_05190 (lpdA)
00280 Valine, leucine and isoleucine degradation
F1C79_05190 (lpdA)
00310 Lysine degradation
F1C79_05190 (lpdA)
00380 Tryptophan metabolism
F1C79_05190 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
F1C79_05190 (lpdA)
00670 One carbon pool by folate
F1C79_05190 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pden04147
]
F1C79_05190 (lpdA)
Enzymes [BR:
pden01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
F1C79_05190 (lpdA)
Exosome [BR:
pden04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
F1C79_05190 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
AlaDh_PNT_C
GIDA
HI0933_like
DAO
FAD_oxidored
FAD_binding_3
NAD_binding_8
Thi4
3HCDH_N
2-Hacid_dh_C
Lys_Orn_oxgnase
UDPG_MGDP_dh_N
Lycopene_cycl
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
QEY71087
UniProt:
A0A9X7MWR2
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All DBs
Position
1100612..1102048
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AA seq
478 aa
AA seq
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MSQKFDVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFDVHGISTGEVKMDVPAMIGRKANIVKNLTGGIATLFKANGVTSFEG
HGKVLANKQVEVTGLDGKTQVLEADNIIIASGSKPVEIPPAPLTEDIIVDSTGALEFQSV
PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKTLTKQGLNIR
LGARVTGSDVKKKQVTVTFTDANGEQKEVFDKLIVAVGRRPVTTDLLAADSGVTLDERGF
IFVDDQCKTSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQQLKGEGVEVNVGTFPFAASGRAMAANDTGGLVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaattcgacgtggttgtgattggtgccggccccggcggttacgtagccgcc
atccgtgccgcccaactcggcctgaagaccgcttgcatcgagaagtacatcggtaaagag
ggcaaggtcgctctcggcggtacctgcctgaacgtaggctgcattccgtccaaggcgctg
ctggacagctcctggaagtacaaggaagccaaagagagcttcgacgttcacggtatctcc
actggcgaagtgaagatggacgttccggcgatgattggtcgcaaggccaacatcgtgaag
aacctgaccggcggcatcgccaccctgttcaaggccaacggcgtgacctccttcgaaggc
cacggcaaggtcctggccaacaagcaggtcgaagtgaccggcctggatggcaagacccag
gttctggaagccgacaacatcatcatcgcttcgggctccaagccggtcgaaatcccgccg
gccccgctgaccgaagacatcatcgtcgactccaccggcgccctggaattccagagcgta
ccgaagaagctcggcgtgatcggcgctggcgtcatcggcctggaactgggttcggtctgg
gctcgcctgggcgctgaagtcaccgtcctggaagccctggacaaattccttccggctgcc
gacgagcagatcgccaaggaagccctgaagaccctgaccaagcaaggtctgaacatccgc
ctgggcgcgcgcgtcaccggttcggacgtgaagaagaagcaggtcaccgtgaccttcacc
gacgccaacggcgagcagaaggaagtcttcgacaagctgatcgtggccgtgggccgtcgc
ccggtgaccaccgatctgctggctgccgacagcggcgtgaccctggacgagcgtggcttc
atcttcgtcgacgaccagtgcaagaccagcgttccgggcgtctacgccatcggtgacgtg
gtccgcggcgccatgctggcgcacaaggcctcggaagagggcgtgatggttgccgagcgc
atcgccggccacaaggcccagatgaactacgacctgattccgtcggtgatctacacccac
ccggaaatcgcatgggtcggcaagaccgagcagcaactcaagggtgaaggcgtcgaagtc
aacgtcggtaccttcccgttcgccgccagcggccgcgccatggctgccaacgacaccggc
ggtctggtcaaggtcatcgccgatgccaagaccgaccgcgtactgggcgtccacgtgatc
ggcccgagcgccgccgagctggttcagcagggcgcgatcggcatggaattcggcaccagt
gccgaagacctgggcatgatggtcttctcccacccgactctgtccgaagcgctgcacgaa
gcggccctggcagtgaatggccacgccatccacatcgccaaccgcaagaagcgctaa
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