KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_05190
Entry
F1C79_05190       CDS       T09478                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Pathway
pden00010  Glycolysis / Gluconeogenesis
pden00020  Citrate cycle (TCA cycle)
pden00260  Glycine, serine and threonine metabolism
pden00280  Valine, leucine and isoleucine degradation
pden00310  Lysine degradation
pden00380  Tryptophan metabolism
pden00620  Pyruvate metabolism
pden00630  Glyoxylate and dicarboxylate metabolism
pden00640  Propanoate metabolism
pden00670  One carbon pool by folate
pden00785  Lipoic acid metabolism
pden01100  Metabolic pathways
pden01110  Biosynthesis of secondary metabolites
pden01120  Microbial metabolism in diverse environments
pden01200  Carbon metabolism
pden01210  2-Oxocarboxylic acid metabolism
pden01240  Biosynthesis of cofactors
Module
pden_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pden_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pden_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pden_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:pden00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    F1C79_05190 (lpdA)
   00020 Citrate cycle (TCA cycle)
    F1C79_05190 (lpdA)
   00620 Pyruvate metabolism
    F1C79_05190 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    F1C79_05190 (lpdA)
   00640 Propanoate metabolism
    F1C79_05190 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    F1C79_05190 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    F1C79_05190 (lpdA)
   00310 Lysine degradation
    F1C79_05190 (lpdA)
   00380 Tryptophan metabolism
    F1C79_05190 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    F1C79_05190 (lpdA)
   00670 One carbon pool by folate
    F1C79_05190 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pden04147]
    F1C79_05190 (lpdA)
Enzymes [BR:pden01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     F1C79_05190 (lpdA)
Exosome [BR:pden04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   F1C79_05190 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 AlaDh_PNT_C GIDA HI0933_like DAO FAD_oxidored FAD_binding_3 NAD_binding_8 Thi4 3HCDH_N 2-Hacid_dh_C Lys_Orn_oxgnase UDPG_MGDP_dh_N Lycopene_cycl Amino_oxidase
Other DBs
NCBI-ProteinID: QEY71087
UniProt: A0A9X7MWR2
LinkDB
Position
1100612..1102048
AA seq 478 aa
MSQKFDVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFDVHGISTGEVKMDVPAMIGRKANIVKNLTGGIATLFKANGVTSFEG
HGKVLANKQVEVTGLDGKTQVLEADNIIIASGSKPVEIPPAPLTEDIIVDSTGALEFQSV
PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKTLTKQGLNIR
LGARVTGSDVKKKQVTVTFTDANGEQKEVFDKLIVAVGRRPVTTDLLAADSGVTLDERGF
IFVDDQCKTSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQQLKGEGVEVNVGTFPFAASGRAMAANDTGGLVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagccagaaattcgacgtggttgtgattggtgccggccccggcggttacgtagccgcc
atccgtgccgcccaactcggcctgaagaccgcttgcatcgagaagtacatcggtaaagag
ggcaaggtcgctctcggcggtacctgcctgaacgtaggctgcattccgtccaaggcgctg
ctggacagctcctggaagtacaaggaagccaaagagagcttcgacgttcacggtatctcc
actggcgaagtgaagatggacgttccggcgatgattggtcgcaaggccaacatcgtgaag
aacctgaccggcggcatcgccaccctgttcaaggccaacggcgtgacctccttcgaaggc
cacggcaaggtcctggccaacaagcaggtcgaagtgaccggcctggatggcaagacccag
gttctggaagccgacaacatcatcatcgcttcgggctccaagccggtcgaaatcccgccg
gccccgctgaccgaagacatcatcgtcgactccaccggcgccctggaattccagagcgta
ccgaagaagctcggcgtgatcggcgctggcgtcatcggcctggaactgggttcggtctgg
gctcgcctgggcgctgaagtcaccgtcctggaagccctggacaaattccttccggctgcc
gacgagcagatcgccaaggaagccctgaagaccctgaccaagcaaggtctgaacatccgc
ctgggcgcgcgcgtcaccggttcggacgtgaagaagaagcaggtcaccgtgaccttcacc
gacgccaacggcgagcagaaggaagtcttcgacaagctgatcgtggccgtgggccgtcgc
ccggtgaccaccgatctgctggctgccgacagcggcgtgaccctggacgagcgtggcttc
atcttcgtcgacgaccagtgcaagaccagcgttccgggcgtctacgccatcggtgacgtg
gtccgcggcgccatgctggcgcacaaggcctcggaagagggcgtgatggttgccgagcgc
atcgccggccacaaggcccagatgaactacgacctgattccgtcggtgatctacacccac
ccggaaatcgcatgggtcggcaagaccgagcagcaactcaagggtgaaggcgtcgaagtc
aacgtcggtaccttcccgttcgccgccagcggccgcgccatggctgccaacgacaccggc
ggtctggtcaaggtcatcgccgatgccaagaccgaccgcgtactgggcgtccacgtgatc
ggcccgagcgccgccgagctggttcagcagggcgcgatcggcatggaattcggcaccagt
gccgaagacctgggcatgatggtcttctcccacccgactctgtccgaagcgctgcacgaa
gcggccctggcagtgaatggccacgccatccacatcgccaaccgcaagaagcgctaa

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