Pseudomonas denitrificans (nom. rej.): F1C79_05870
Help
Entry
F1C79_05870 CDS
T09478
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00300
Lysine biosynthesis
pden00470
D-Amino acid metabolism
pden01100
Metabolic pathways
pden01110
Biosynthesis of secondary metabolites
pden01120
Microbial metabolism in diverse environments
pden01230
Biosynthesis of amino acids
Module
pden_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F1C79_05870 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F1C79_05870 (lysA)
Enzymes [BR:
pden01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F1C79_05870 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QEY71205
UniProt:
A0A9X7MXP6
LinkDB
All DBs
Position
complement(1250332..1251576)
Genome browser
AA seq
414 aa
AA seq
DB search
MTFLALPRAEQLALQFGTPLWIYDAATIRGQIERLKSFDIIRFAQKACSNLHILRLMREQ
GVKVDAVSQGELLRALAAGYSCREDESEIVFTADLLDRTTLETVVEHGIPVNAGSIDMLR
QLGEVAPGHPVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSDLRAALDVIRERGLRLVGL
HMHIGSGVDYGHLAQVGEAMLGLVQQVKDAGHDLSGISAGGGLSIPYRAGDPEVDTAHYF
QLWDKARKAAEAVVGHKLHLEIEPGRYLVAQSGCLLSEVRATKDAGRNHFVLVDAGFNEL
MRPSMYGSYHGIRVLAGDVASREVIDTVVAGPLCESGDVFTQGDGGVVIPRALPRAQVGD
LLLIEDTGAYGASMSSNYNSRPLIAEVLLEGTDAKLIRRRQRVEELLALEEDLG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgactttcctcgccctgccccgcgccgaacagctcgccctgcaattcggcaccccgctg
tggatctacgacgcagccaccatccgcggccagatcgagcgcctgaaaagcttcgacatc
atccgcttcgcccagaaggcctgctccaacctgcacatcctgcgcctgatgcgcgaacag
ggggtgaaggtcgatgcggtatcccagggcgaactgctgcgtgccctggccgccggctac
tcgtgccgcgaggatgaatccgagatcgtcttcaccgccgacctgctggaccgcaccacc
ctggaaaccgtggtcgagcacggcatcccggtgaacgccggctccatcgacatgctccgc
cagctgggcgaggtcgcccccggtcatccggtgtggctgcgcatcaaccccggtttcggt
cacggccacagcaacaagaccaacaccggcggcgaacactccaagcacggcatctggcac
agcgacctgcgcgccgccctggacgtgatccgcgagcgcggcctgcgtctggtcggcctg
cacatgcacatcggttcgggcgtcgactacggccacctggcccaggtcggcgaagccatg
ctcggcctggtgcagcaggtgaaggacgccggtcatgatctgtccggcatctctgccggc
ggcggcctgtccatcccctaccgcgccggcgacccggaagtggacaccgcgcactacttc
cagctgtgggacaaggcgcgcaaggccgccgaggccgtggtcggccacaagctgcacctg
gagatcgaaccgggccgctacctggtcgcccagtccggctgcctgctcagcgaagtgcgc
gccaccaaggacgccggccgcaaccacttcgtgctggtggacgccggcttcaacgagctg
atgcgcccatccatgtacggcagctaccacggcatccgcgtgctggccggcgacgtcgcc
agccgcgaggtgatcgataccgtggtggccggcccgctgtgcgaatccggtgacgtgttc
acccagggcgatggcggcgtggtcatcccccgcgccctgccgcgcgcccaggtcggcgac
ctgctgctgatcgaggacaccggcgcctatggcgcgtccatgtcgtcgaactacaacagc
cgcccgctgattgccgaggtgctgctcgaaggcaccgacgcgaagctgatccgccgccgc
cagcgtgtggaagagctgctggccctggaagaagacctgggctga
DBGET
integrated database retrieval system