Pseudomonas denitrificans (nom. rej.): F1C79_06235
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Entry
F1C79_06235 CDS
T09478
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F1C79_06235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pden03021
]
F1C79_06235
Transcription machinery [BR:
pden03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F1C79_06235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
TnsD
HTH_11
HTH_Tnp_4
HTH_64
HTH_SB
DUF1804
Motif
Other DBs
NCBI-ProteinID:
QEY71268
UniProt:
A0A9X7MXR0
LinkDB
All DBs
Position
1333570..1334100
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AA seq
176 aa
AA seq
DB search
MTSQGPIRQLEVGDLYKEQHRWLRGWLRSRVDCSQLAADLVQDVFLRLLGSTDRQGRIEA
VREPRSFLATVARRLMIDHFRRQRLERAWLQALAEVPEALDISAEDRLILMETLVELDAM
LAALGDKVRQAFLLSQLDGMTYRCIAQTLGVSLVTVNRYIAKASRHCMLYSLEHGL
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccagggcccgatccggcagctggaggtcggcgacctctataaggaacagcac
cgctggctgcgtggctggttgcgcagtcgtgtggattgcagccaactggcggctgacctg
gttcaggacgtcttcctccgcctgctcggcagtaccgatcggcaggggcgcatcgaagcg
gtgcgtgagccacgcagctttctggcgacggtcgcgcgccggttgatgatcgatcacttc
cgtcgtcagcgcctggagcgtgcgtggctgcaggcgctggccgaggtgccggaagccctg
gacatatccgccgaggatcggctgatcctcatggaaaccctggtcgaactcgacgccatg
cttgccgcgctcggcgacaaggtgcgccaggccttcctgttatcccagctcgacggcatg
acctaccgctgcattgcccagactcttggcgtgtcgctcgtcacggtgaaccgctacatc
gccaaggcctcgcgtcattgcatgctctacagcctggagcacggcttgtga
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integrated database retrieval system
