Pseudomonas denitrificans (nom. rej.): F1C79_06575
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Entry
F1C79_06575 CDS
T09478
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pden03032
]
F1C79_06575
03400 DNA repair and recombination proteins [BR:
pden03400
]
F1C79_06575
Enzymes [BR:
pden01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F1C79_06575
DNA replication proteins [BR:
pden03032
]
Prokaryotic type
DNA Topoisomerases
F1C79_06575
DNA repair and recombination proteins [BR:
pden03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1C79_06575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QEY71330
UniProt:
A0A9X7N083
LinkDB
All DBs
Position
complement(1403316..1404338)
Genome browser
AA seq
340 aa
AA seq
DB search
MGTPSELPELPPDLHYVDDSLPGISRRRLRGRFAYFDPDGERIRVEAEIQRIDQLAIPPA
YIDVWICIDPLGHLQATGRDVRGRKQYRYHPRWTEVRDSAKYERLLRFGECLPALRRRIE
QDLAQPGLGAEKVMATVVALLDRTLIRIGNQRYRKENRSFGLTTLNNRHVDVQGTRIHFA
FRGKSGVKHSVDIEHPRLACILRRCLELPGQQLFQYLDEERQRHMIDSRDINAYLREHAG
EGFTAKDYRTWAGTALALEYCRKTRWEDEKSANRQLKEIIQRVADELGNTPAICRKCYVH
PLVVEAFLAGELAGLRKQRKRQNLSAEEATLLAFLSRTPS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaccgtcggaactgcctgagctaccgcccgacctgcactacgtcgacgacagc
ctgccgggtatcagccggcgccggctgcgcgggcgcttcgcctatttcgacccggatggc
gaacgcatccgcgtggaggcggaaatccagcgcatcgaccagctcgccattccgcctgca
tatatcgatgtgtggatctgcatcgacccgcttggccacctgcaggccaccgggcgcgac
gtgcgcgggcgcaagcaatatcgctaccacccgcgctggaccgaggtgcgcgacagcgcc
aagtacgaacgcctgctgcgcttcggcgagtgcctgccagccctgcgccggcgcatcgag
caagatctggcgcagccgggcctgggcgcggagaaggtcatggcgaccgtggtcgcgctg
ctcgatcgcacactgatccgcatcggcaaccagcgctaccgcaaggagaaccgctccttc
ggcctcacgaccctgaacaaccgccatgtcgacgtgcagggcacccgcatccacttcgcc
tttcgcggcaagagcggcgtcaagcacagcgtggacatcgagcacccgcgcctggcgtgc
atcctccggcgctgcctggagctgcccggccagcaactgttccagtacctggacgaagag
cggcagcggcatatgatcgactcccgcgacatcaacgcctacctgcgtgagcacgctggc
gaagggttcaccgccaaggactaccgaacctgggcgggcaccgccctggccctggagtac
tgccgcaagacccgctgggaggacgagaaaagcgccaaccgccagctcaaggagatcatc
cagcgggtcgccgacgagttgggcaataccccggcaatctgccgcaaatgctacgtgcat
ccgctggtggtcgaagccttcctcgctggcgaactggccggcctgcgcaagcagcgcaag
cggcagaacctgagcgccgaagaggccaccctcctggcatttctctcgcgcacgccgtcc
tga
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