Pseudomonas denitrificans (nom. rej.): F1C79_09440
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Entry
F1C79_09440 CDS
T09478
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F1C79_09440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pden02000
]
F1C79_09440
Transporters [BR:
pden02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
F1C79_09440
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Ortholog
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
QEY71826
UniProt:
A0A9X7R3U5
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All DBs
Position
complement(2107222..2108262)
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AA seq
346 aa
AA seq
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MNKILSSSIACALGCAATFPAFADLTVVSHGGANKAAQVKAFYQPYMQQSGSRLIADEFN
GEMAKVKVQVDTGSVSWDVVEMEMPELARACDEGLLQEIGEQPGIAKLAPELLDGAVQPC
GVGFFVWSTVLAYNADKLKSAPTGWADFWDTQKFPGKRGLRKGAMYTLEFALMADGVAPK
DVYAVLGTKEGQDRAFRKLDQIKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQDE
SQLRVVWNGGIYDMDAFAIPKGAKNTEEGLRFIQYVLQTEQQKNYAQQIAYGPVNRAAVP
LVDAARRTNMPTDEANLAGQVAMNAAFWADHGEQLEQRFNAWAAKQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatcctgagttcctccatcgcctgcgccctgggttgcgcggcgactttccct
gccttcgccgacctcaccgtggtctcccacggcggcgccaacaaggctgcccaggtcaag
gccttctaccagccctacatgcagcagagcggcagccgcctgatcgccgacgagttcaac
ggcgaaatggccaaggtcaaggtgcaggtcgataccggcagcgtctcctgggatgtggtg
gagatggaaatgccggaactggcgcgggcctgcgacgagggcctgctgcaggaaatcggc
gagcagccgggtatcgccaagctcgccccggagctgctggatggcgcggtacagccttgc
ggcgtgggcttcttcgtctggtccacggtgctagcctacaacgccgacaagctcaaaagc
gcgcccaccggctgggcggatttctgggacacgcagaaattccctggcaagcgcggcctg
cgcaagggcgcgatgtacacgctggagttcgccctgatggccgacggcgtggcgccgaag
gatgtctacgccgtgctcgggacgaaggaaggccaggaccgcgccttcaggaagctcgac
cagatcaaaccgagcatccagtggtgggaagccggcgcacagccgccgcaatacctggct
tccggcgacgtggtgatgagctccgcctacaacggccgcatcgctgccgtgcaggacgaa
agccagctgcgcgtggtatggaacggcggcatctatgacatggacgccttcgccattccc
aagggcgcgaagaataccgaggaaggcctgcgcttcatccagtacgtgctgcagaccgaa
cagcagaagaactacgcgcagcagatcgcctatggcccggtgaaccgcgccgcggtcccg
ctggtggacgccgcccgccgcaccaacatgcctaccgacgaggccaacctggccggtcag
gtggcgatgaatgcggccttctgggccgaccatggcgagcagctggagcagcgcttcaac
gcctgggccgccaagcagtaa
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