Pseudomonas denitrificans (nom. rej.): F1C79_11490
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Entry
F1C79_11490 CDS
T09478
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00550
Peptidoglycan biosynthesis
pden01100
Metabolic pathways
pden01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F1C79_11490 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F1C79_11490 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
F1C79_11490 (mrdA)
Enzymes [BR:
pden01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
F1C79_11490 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
F1C79_11490 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
QEY72183
UniProt:
A0A9X7MZD4
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Position
complement(2562687..2564579)
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AA seq
630 aa
AA seq
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MHDPIKLKDHQQEATLVNRRLIACGALVALMSVTLVARMYFLQVTDYATNATVSENNRIH
VLPIPPERGLIFDRNGKVLAENLPSFNLTLTRERAGNSQAVLDQVTDILHLSPEQRLQCD
KALKKSRHPFEPVAILHDLSEEQIALIEVNRYKLPGIDVDAEFVRHYPYGEHFAHSVGFV
GRINEREAARLDSTEYRGTEYVGKTGVEHFYEPQLHGHVGYEEVETNAQGRVMRVLKKVP
PVAGENIVLGLDVDLQVAAEKALGDRRGSVVALDPNTGQVLAMVSNPSFDPNLFVNGISS
AQYAQLRDSIDRPLFNRALRGLYSPGSTIKPVVAIAGLDTGTITPATRVFDPGYFQLPNY
DHKYRNWNHSGDGWVDLDTAIKRSNDTYFYDVAHKLGIDRMHDYLTRFGLGSKVSIDMAE
ESSGLMPSREWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAEATSLIASKGAWHRPRL
AESVGGEDVVDNNPMPDIHLSNPHDWDAVNYGMQLVMHDPGGGARAAGQGAQYRIAGKSG
TAQIVAIRQGERYNRLKTKERHRDNALFVGFAPAAEPSIVVSVTIENGEAGGRVAGPVVR
EIMDAWLLDADGKLKPQYAVPAETASGKHA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatccgatcaaactcaaggaccaccagcaggaggcgacgctggtcaaccgccgc
ctgatcgcctgcggcgcgctcgtggccctgatgagcgtgaccctggtggcaaggatgtac
ttcctccaggtcaccgactacgcgaccaacgccaccgtctccgagaacaaccgcatccat
gtcctgccgatccccccggagcgcgggctgatcttcgaccgcaacggcaaggtgctcgcc
gagaacctgcccagcttcaacctcaccctgacccgcgagcgcgccggcaattcacaggcg
gtgctggaccaggtgaccgatatcctccacctgagccctgagcagcgcctgcagtgcgac
aaggcgctgaagaagagccgccatcccttcgagccggtcgccatcctgcatgatctgagc
gaggagcagatcgccctcatcgaggtcaatcgctacaagctgccgggtatcgatgtggat
gccgagttcgtccgccactatccctacggcgagcacttcgcccattcggtcggcttcgtc
gggcggatcaacgagcgcgaggcggcgcggctcgacagcaccgaataccggggcaccgag
tacgtcggcaagaccggtgtcgaacacttctacgagccgcagctgcacggccacgtcggc
tacgaggaagtcgagaccaacgcccagggccgcgtcatgcgcgtgctgaagaaggtgccc
ccggtggccggcgagaacatcgtgctgggcctggatgtggacctgcaggtcgccgccgag
aaggccctgggcgatcgccgcggctcggtggtggcgctggacccgaacaccggccaggtg
ctggcgatggtcagcaacccgagcttcgacccgaacctgttcgtcaacggcatcagctcg
gcgcagtacgcgcagctgcgtgactccatcgaccggccgctgttcaaccgggcgctgcgc
gggctgtattcgccgggctcgaccatcaagccggtggtggccatcgccgggctggatacc
ggcaccatcaccccggccacgcgggtcttcgatccgggttacttccagctgcccaactac
gaccacaagtaccgcaactggaaccacagcggcgatggctgggtggacctggacacggcc
atcaagcgctccaacgacacctacttctacgacgtcgcgcacaagctcggcatcgaccgc
atgcacgactacctgacacgcttcgggctgggcagcaaggtgtccatcgacatggccgag
gaatcctccggcctgatgccgtcccgcgagtggaaacgcgccacccggcgtcaggcctgg
ttccccggcgagacggtgatcctcggtatcggccagggctacatgcaggtgacgccgctg
cagctagcggaagcgacctcgctgatcgccagcaagggcgcctggcatcgtccgcggctg
gccgagtcggtgggcggtgaagacgtggtcgacaacaatcccatgcccgacatccacctg
agcaatccccacgactgggatgcggtgaactacggcatgcagctggtgatgcacgatccg
ggcggcggcgcgcgggccgcagggcagggcgcgcagtaccgcattgctggcaagagcggc
accgcgcagatcgtcgcgatccgccagggcgagcgctacaaccgcctgaagaccaaggag
cgccaccgcgacaacgcgctgttcgtcggcttcgccccggcggccgagccttccatcgtg
gtctcggtgaccatcgagaacggcgaggctggtggccgcgtggccgggccggtggtgcgc
gagatcatggatgcctggctgctcgatgcggacggcaagctcaagccgcagtacgcggtg
ccggccgagacggcttcgggcaagcacgcctga
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