KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_12670
Entry
F1C79_12670       CDS       T09478                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:pden00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pden03032]
    F1C79_12670
   03036 Chromosome and associated proteins [BR:pden03036]
    F1C79_12670
   03400 DNA repair and recombination proteins [BR:pden03400]
    F1C79_12670
DNA replication proteins [BR:pden03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    F1C79_12670
Chromosome and associated proteins [BR:pden03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    F1C79_12670
DNA repair and recombination proteins [BR:pden03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      F1C79_12670
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 SSPI
Other DBs
NCBI-ProteinID: QEY72388
UniProt: A0A9X7MZL4
LinkDB
Position
complement(2824049..2824327)
AA seq 92 aa
MPMTKDQLVRDIAESLDLTQAAVRGVFEQLAQIAQDALENDGELTLPGIGKLKVSERAAR
TGRNPQTGKTIEIAAKKAVRLVPAKALVDSLN
NT seq 279 nt   +upstreamnt  +downstreamnt
atgcccatgaccaaggaccaactggttcgtgatatcgccgaatccctcgacctgacccag
gccgccgtgcgcggcgtgttcgagcaactggcgcagatcgcccaggacgccctggagaac
gacggtgagctgaccctgccggggatcggcaagctcaaggtcagtgaacgcgctgcccgc
accggccgcaacccgcagaccggcaagaccatcgagatcgccgcgaagaaggcggtacgc
ctggtgcctgccaaggccctggtcgacagcctgaactga

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