Pseudomonas denitrificans (nom. rej.): F1C79_13025
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Entry
F1C79_13025 CDS
T09478
Name
(GenBank) collagen-like triple helix repeat-containing protein
Organism
pden
Pseudomonas denitrificans (nom. rej.)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen_mid
Motif
Other DBs
NCBI-ProteinID:
QEY72450
UniProt:
A0A9X7N040
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All DBs
Position
2897782..2899422
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AA seq
546 aa
AA seq
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MSGPIRVFALSLLVVALSLQGCSSHGGSSHHRASDSSSTDDGSGSGGDGSGGTGGTGGTD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NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtccgattcgtgttttcgcactttcccttctcgtcgttgccctctcgctgcaa
ggttgcagcagccacggcggcagcagtcaccaccgcgcttccgatagcagcagcaccgac
gatggctccggctccggcggcgatggcagcggcggtactggcggtaccggtgggactgat
ggaaccggcggcaccggcgggaccgatggaactggcgggaccggcggcactggcgggacg
ggcggcaccgacggaaccggtggcaccggcggtaccggaggaacgggcggtaccggagga
acgggcggcggcgacggcacaggcggcggcaccaccactccgccagccagtaccaccggc
aatatcctgaccaataccggcgaagcggtctccaatgtcggcgacaccgtgagcaccgtc
ggcgccgtggtgaagacagtcgacctgccggtgctgggcaatggcgtcacgcagaatgcc
ggcaccctggtccaggaagtcggcgccggtgtggacagcgtcggcaccggcgtcaccaac
ggtctcggccaactgggcaacaaccccaacgccattggcaccaccgtcgccggcgccacc
ggcctggtcagccacaccggtggcgcagtcagcagcctgggcgacaccgtggcggccatc
ggtgatgccccggtgctggccaacaccccgctcaatggcctgaccggccaggtcggcggc
ctggtggacggcgtcggcggcaagatcaccatgctcggcgactctctcagcggcgcagtc
accaccggcccgctgagccaactgaccacccagctcagcggcaccaccgccggactggtc
ggcaaggtcgaaggaaccactcgcggcgtcggcgccgccaccggactgggaacgccggtg
aacaacctgttgaccaccgtcggcggtgttgtgacccagacaggcaaccaggtagccagt
gcgaatccggcgctggcaccggtcggcggaatcgtcagcgatgcgggtcaggcagtcagc
gcggccggcggcttggtcaatggcagcaatccgggcggtggtctgctcggcaacgtcacc
ggcgcactggctggcgccaccggcggcagtaatccggtgggcggcgtggtcagcggcgtg
accggtgcagtgggcggtatcaccggttctctgggtggtgccaccggcggcagcaacccg
gtaggcggcctggtcagcggtgtgaccggcgcagtaggcggcctcaccggatccctgggc
ggcgccaccggcggcagtaatccggtgggtggcctggtcagcggtgtgaccggcgcagta
ggcggcctcaccggctctctgggcggcgccaccggcggcagcaacccggtaggcggcctg
gtcaacggcgtggccggcaccgtcggcggcgtgaccagcagcctcaccggcggtggcggc
ctggtcgccggggcaggcgtgggcatcggcagcaacacccagggttcgggcgtggcagtc
ggcgcaggcgccggtacgactggcggtaccagcggtcagggaggcctgctgggcaatacg
ctgggcgctgtgggtggcgcgctgggtggtgtgaccggcggactgggtggtggattggcg
atcggtacgcccaagcaataa
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