Pseudomonas denitrificans (nom. rej.): F1C79_13110
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Entry
F1C79_13110 CDS
T09478
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pden01002
]
F1C79_13110
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
F1C79_13110
Peptidases and inhibitors [BR:
pden01002
]
Cysteine peptidases
Family C82
F1C79_13110
Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
F1C79_13110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
FAS_meander
Motif
Other DBs
NCBI-ProteinID:
QEY72465
UniProt:
A0A9X7N053
LinkDB
All DBs
Position
complement(2913464..2914447)
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AA seq
327 aa
AA seq
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MLSRVIAACSLSLAALLSAGPVSAIELPLPAPGDDIVGQVQVIKAKYEDTFADLGEKYGL
GYSEMIAANPGVDAWLPGVGTEVIIPTRFVLPAGPREGVVINLAEYRLYYFPKDKNVVYT
YALGIGREGWGSPVGSTSVIAKTKDPAWYPPASIRAEHAADGDPLPTVVPPGPDNPLGPY
KMSLGFHGYLIHGSNKKFGIGTRTSHGCFRMYNWDVTQLFSMIPVGTKVRIINEPYKFGR
SEGKIYLEAHAPIDDNGDPSVVDKHTAVINALLKREDIASQMQMDWNVVREVVAAEDGLP
VAIAQPQQVQQGGSVAATVDQDAVPLQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcgtcattgccgcctgctcgctgtccctcgccgcgctgctctcggccggc
cccgtttccgccattgaattgccgctgccggcgccgggcgacgatatcgtcggccaggtc
caggtcatcaaggccaagtacgaagacaccttcgccgacctgggcgagaagtacggcctc
ggctactccgagatgatcgctgccaacccgggcgtcgatgcctggctgccgggcgtgggc
accgaggtcatcattccgacccgtttcgtcctgccggcaggtccgcgcgaaggcgtggtg
atcaacctcgccgaataccgcctgtactacttccccaaggacaagaacgttgtctacacc
tacgccctggggatcggtcgtgagggctggggttcgccggtgggcagcaccagcgtgatc
gccaagaccaaggatccggcctggtacccgccggcctcgatccgcgccgagcacgccgcc
gacggcgatccgctgccgaccgtagtgccgccgggtccggacaacccgctgggtccgtac
aagatgagcctgggcttccatggctacctgatccacggttcgaacaagaagttcggcatc
ggcacccgtaccagccacggttgcttccgcatgtacaactgggacgtgacccagctcttc
tcgatgattccggtgggcaccaaggtgcgcatcatcaacgagccgtacaagttcggtcgc
agcgaaggcaagatctacttggaagcccacgcgcccatcgatgacaacggcgacccgtcc
gtggtcgacaagcacactgcggtgatcaacgccctgctcaagcgcgaagacatcgccagc
cagatgcagatggactggaacgtggtgcgtgaagtggttgccgccgaagacggcctgccg
gtagccattgcccagccgcagcaagtgcagcagggtggttcggttgccgctactgttgac
caggacgccgtgccgctgcagtaa
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