KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_15720
Entry
F1C79_15720       CDS       T09478                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Pathway
pden03030  DNA replication
pden03430  Mismatch repair
pden03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pden00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F1C79_15720
   03430 Mismatch repair
    F1C79_15720
   03440 Homologous recombination
    F1C79_15720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pden03032]
    F1C79_15720
   03400 DNA repair and recombination proteins [BR:pden03400]
    F1C79_15720
Enzymes [BR:pden01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F1C79_15720
DNA replication proteins [BR:pden03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     F1C79_15720
DNA repair and recombination proteins [BR:pden03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     F1C79_15720
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QEY72934
UniProt: A0A9X7N0X5
LinkDB
Position
complement(3461992..3462618)
AA seq 208 aa
MNACVAAPDPHWSAWRRRLYWWRHDPAEAEELVSLDLETTSLDPHKADILSIGAVVIRRG
KLILGERLELLVEPPPSLDGESIRIHKLRRADLEGQLPLVEALRRVQAFIGERPLLGYYL
SFDVAVLRRHLHEQFGARLDNPRVEVSEIYHRKMSRRFPDLHLDLRFDTLARNLDIPIEG
RHTAIGDARTAALMFLRLRKGSLPRDLS
NT seq 627 nt   +upstreamnt  +downstreamnt
atgaacgcctgcgtcgctgcccccgatccgcactggtccgcctggcgccgccgcctctac
tggtggcggcacgatccggcggaggcggaagagctggtatcgctggatctggagaccacc
agtctcgacccgcacaaggccgacatcctcagcatcggcgcggtggtgatccggcgtggc
aagctgatcctcggcgagcgcctggagttgctggtggagccgccgccgtcgctggacggc
gagtcgattcgcatccacaaactgcgtcgtgccgatctcgaaggccagttgccgctggtg
gaggcgttgcgccgggtgcaggccttcatcggcgaacggccgctgctgggctactacctg
tcgttcgacgtcgcggtgctgcgccggcacttgcatgaacagttcggcgcgcggctggac
aacccccgcgtggaggtctcggagatctaccaccgcaagatgagccggcgctttcccgac
ctgcacctggacctgcgcttcgacaccctggcgcgcaatctggatatccccatcgaagga
cgccataccgccatcggcgatgcgcgcaccgccgcgctgatgttcctgcgcctgcgcaag
ggctcgctgccccgcgacttgagctga

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