Pseudomonas denitrificans (nom. rej.): F1C79_16150
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Entry
F1C79_16150 CDS
T09478
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F1C79_16150 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pden03400
]
F1C79_16150 (ruvB)
Enzymes [BR:
pden01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1C79_16150 (ruvB)
DNA repair and recombination proteins [BR:
pden03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1C79_16150 (ruvB)
RecFOR pathway proteins
F1C79_16150 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_22
TIP49
nSTAND3
AAA_17
AAA_16
Rad17
AAA_28
AAA_18
RNA_helicase
AAA_14
ABC_tran
Resolvase
TsaE
NTPase_1
AAA_24
NB-ARC
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-ProteinID:
QEY73008
UniProt:
A0A9X7N101
LinkDB
All DBs
Position
complement(3542254..3543312)
Genome browser
AA seq
352 aa
AA seq
DB search
MIEADRLISSVTGRDREEQLDRAIRPLKLADYVGQPVVREQMELFIQAARGRQEALDHTL
IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPNDVLFVDEIHRLS
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
RLEFYGVDDLSSIVARSAGILGLEIEPAGAYEIARRARGTPRIANRLLRRVRDFAEVRGT
GHISSDIADKALNLLDVDERGFDHQDRRLLLTMIDKFDGGPVGIDNLAAAISEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNVPKRMGEGTTSDLFVPEDGN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagccgatcgcctgatctcctctgtaaccggtcgtgaccgcgaagagcagctc
gaccgcgccatccgcccgctgaagctggccgactacgtcggtcagccggtggtgcgtgaa
cagatggagttgttcatccaggcggcccgtgggcgccaggaggcgctggatcacacgctg
atcttcggcccgcccggcctgggcaagaccaccctggcgaacatcatcgcccaggaaatg
ggggtttcgatcaagagcacttccggcccggtgctggagcggcctggcgatctggcggcg
ctgctgaccaacctcgaacccaacgacgtgctgttcgtggacgagattcaccgcctctcg
cccatcgtcgaggaagtgctgtatccggccatggaagacttccagctggacatcatgatc
ggcgagggcccggctgcgcgttcgatcaagctcgatctgccgcccttcactctggtgggg
gcgaccactcgcgccggcatgctgaccaacccgctgcgtgaccgcttcggtatcgtgcag
cgtctggagttctacggtgtggacgacctgtccagcatcgtcgcccgttcggcgggcatt
ctcggtctggagatcgagccggcgggcgcctacgagatcgctcggcgcgcacgcggtacg
ccgcggatcgccaaccgcctgctgcggcgggtgcgggatttcgccgaggtgcgcggcacc
ggccacatcagcagcgacatcgccgacaaggcgctgaacctgctggacgtggatgaaaga
ggcttcgatcaccaggatcgccgcctgctgctgaccatgatcgacaagttcgacggtggc
ccggtggggatcgacaacctcgcggcggccatcagcgaagaaagacacacgattgaagac
gtgctggagccctatctgatccagcaaggctatatcatgcgcacacctcgggggcgtgta
gtgacccggcatgcgtacctgcatttcggcttgaatgtgccgaagcggatgggggagggg
acgacatcggatctgttcgtccctgaagatggtaattaa
DBGET
integrated database retrieval system