KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_16150
Entry
F1C79_16150       CDS       T09478                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Pathway
pden03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pden00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    F1C79_16150 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pden03400]
    F1C79_16150 (ruvB)
Enzymes [BR:pden01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F1C79_16150 (ruvB)
DNA repair and recombination proteins [BR:pden03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     F1C79_16150 (ruvB)
    RecFOR pathway proteins
     F1C79_16150 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_3 Mg_chelatase AAA_22 TIP49 nSTAND3 AAA_17 AAA_16 Rad17 AAA_28 AAA_18 RNA_helicase AAA_14 ABC_tran Resolvase TsaE NTPase_1 AAA_24 NB-ARC RsgA_GTPase NACHT
Other DBs
NCBI-ProteinID: QEY73008
UniProt: A0A9X7N101
LinkDB
Position
complement(3542254..3543312)
AA seq 352 aa
MIEADRLISSVTGRDREEQLDRAIRPLKLADYVGQPVVREQMELFIQAARGRQEALDHTL
IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPNDVLFVDEIHRLS
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
RLEFYGVDDLSSIVARSAGILGLEIEPAGAYEIARRARGTPRIANRLLRRVRDFAEVRGT
GHISSDIADKALNLLDVDERGFDHQDRRLLLTMIDKFDGGPVGIDNLAAAISEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNVPKRMGEGTTSDLFVPEDGN
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgatcgaagccgatcgcctgatctcctctgtaaccggtcgtgaccgcgaagagcagctc
gaccgcgccatccgcccgctgaagctggccgactacgtcggtcagccggtggtgcgtgaa
cagatggagttgttcatccaggcggcccgtgggcgccaggaggcgctggatcacacgctg
atcttcggcccgcccggcctgggcaagaccaccctggcgaacatcatcgcccaggaaatg
ggggtttcgatcaagagcacttccggcccggtgctggagcggcctggcgatctggcggcg
ctgctgaccaacctcgaacccaacgacgtgctgttcgtggacgagattcaccgcctctcg
cccatcgtcgaggaagtgctgtatccggccatggaagacttccagctggacatcatgatc
ggcgagggcccggctgcgcgttcgatcaagctcgatctgccgcccttcactctggtgggg
gcgaccactcgcgccggcatgctgaccaacccgctgcgtgaccgcttcggtatcgtgcag
cgtctggagttctacggtgtggacgacctgtccagcatcgtcgcccgttcggcgggcatt
ctcggtctggagatcgagccggcgggcgcctacgagatcgctcggcgcgcacgcggtacg
ccgcggatcgccaaccgcctgctgcggcgggtgcgggatttcgccgaggtgcgcggcacc
ggccacatcagcagcgacatcgccgacaaggcgctgaacctgctggacgtggatgaaaga
ggcttcgatcaccaggatcgccgcctgctgctgaccatgatcgacaagttcgacggtggc
ccggtggggatcgacaacctcgcggcggccatcagcgaagaaagacacacgattgaagac
gtgctggagccctatctgatccagcaaggctatatcatgcgcacacctcgggggcgtgta
gtgacccggcatgcgtacctgcatttcggcttgaatgtgccgaagcggatgggggagggg
acgacatcggatctgttcgtccctgaagatggtaattaa

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