Pseudomonas denitrificans (nom. rej.): F1C79_16680
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Entry
F1C79_16680 CDS
T09478
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00061
Fatty acid biosynthesis
pden00071
Fatty acid degradation
pden01100
Metabolic pathways
pden01212
Fatty acid metabolism
pden02024
Quorum sensing
pden04146
Peroxisome
Module
pden_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F1C79_16680
00071 Fatty acid degradation
F1C79_16680
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F1C79_16680
09145 Cellular community - prokaryotes
02024 Quorum sensing
F1C79_16680
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pden01004
]
F1C79_16680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pden04147
]
F1C79_16680
Enzymes [BR:
pden01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F1C79_16680
Lipid biosynthesis proteins [BR:
pden01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F1C79_16680
Exosome [BR:
pden04147
]
Exosomal proteins
Exosomal proteins of breast milk
F1C79_16680
Exosomal proteins of breast cancer cells
F1C79_16680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QEY73106
UniProt:
A0A9X7N1U9
LinkDB
All DBs
Position
complement(3634737..3636422)
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AA seq
561 aa
AA seq
DB search
MTDNFWKDKYPVGIAAEINADQYPNILAVLKESCQRFADKPAFSNLGKTLTYGEMYKLSG
DFAAYLQQNTDLKPGDRIAVQLPNVLQYPVVVFGAMRAGLVVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEEVLPKTGIRNVIVTEVGDMLPPLKRFIVNFVVRNIKKMVPAYN
IPNAQKLTDVLAKGRGKAVKEVSPHNDDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGANLNEGCEILITPLPLYHIYAFTFHCMAMMLTGNHNILVTNPRDLASMVKELSQWK
FTGFVGLNTLFVGLCNNEGFRKLDFSALKLTLSGGMALQQAAAERWKDVTGCAICEGYGM
TETSPVVSVNPFQNIQIGTIGIPVPSTQCKVISDDGQDLPLGERGELCVKGPQVMKGYWQ
RQEATDEILDKDGWLRTGDIAIIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGIPDEKSGEAIKVFVVSKPGVTLTKEQVMQHMHDNLTGYKRPKSVEFRDSLPT
TNVGKILRRELRDEELKKIRA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaatttctggaaggacaaatacccagtggggatcgctgccgagatcaacgct
gaccagtacccgaacatcctcgcggtactcaaagaatcctgccaacgttttgcagacaag
cctgccttcagcaacctgggcaagaccctgacctacggtgagatgtacaagctctccggg
gacttcgccgcctacctgcaacagaacaccgatctcaagcccggcgaccgcatcgccgtg
cagctgcccaacgtgctccagtacccggtcgtggtcttcggcgccatgcgcgccggcctg
gtcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggcgccaaggcgctggtgtgcctggcgaacatggcgcacctggccgaggaagtgctg
cccaagaccggcatccgcaacgtcatcgtcaccgaagtgggtgacatgctgccgccgctc
aagcgcttcatcgtcaatttcgtggtcaggaacatcaagaagatggttccggcctacaac
atccccaatgcgcagaaactcaccgatgtcctggccaagggccgtggcaaggcggtgaag
gaagtctcgccgcacaacgacgacgtcgccgtgctgcagtacaccggtggcaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctggtcgccaacatgctgcagtgcaag
gcactgatgggcgccaacctcaacgaaggttgcgagatcctcatcaccccgctgccgctg
taccacatctacgccttcaccttccattgcatggcgatgatgctcaccggcaaccacaac
atcctggtgaccaacccgcgcgacctggccagcatggtcaaggaactctcgcagtggaag
ttcaccggcttcgtcggcctgaacaccctgttcgtcggcctgtgcaacaacgaaggcttc
cgcaagctggacttctccgcactgaagctgaccctctccggcggcatggccctgcaacag
gccgctgccgagcgctggaaggacgtcaccggctgcgccatctgcgaaggttacggcatg
accgaaaccagcccggtggtctcggtaaacccgttccagaacatccagatcggcaccatc
ggcatcccggttccgtcgacccagtgcaaggtcatcagcgatgacggccaggacctgccg
ctgggcgagcgcggcgagctgtgcgtcaagggcccgcaggtgatgaagggctactggcag
cgccaggaagccaccgacgagatcctcgacaaggacggctggctgcgtaccggcgatatc
gcgatcatccaggaagacggctacatgcgtatcgtcgaccgcaagaaggacatgatcctg
gtgtcgggcttcaacgtttaccccaacgagctggaagacgtgctcgccaccctgccgggc
gtgctgcagtgcgccgccatcggcatcccggacgagaagtccggcgaggcgatcaaggtc
ttcgtggtgtccaagccgggcgtcaccctgaccaaggagcaagtcatgcagcacatgcac
gacaacctcaccggttacaagcgtcccaagtccgtggagttccgcgacagcctgccgacc
accaacgtcggcaagatcctgcgccgcgaattgcgcgacgaagagctcaagaagatcagg
gcttaa
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