KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_16885
Entry
F1C79_16885       CDS       T09478                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Pathway
pden02024  Quorum sensing
pden03060  Protein export
pden03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pden00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    F1C79_16885
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    F1C79_16885
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    F1C79_16885
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pden02044]
    F1C79_16885
Enzymes [BR:pden01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     F1C79_16885
Secretion system [BR:pden02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   F1C79_16885
  Eukaryotic Sec-SRP protein
   F1C79_16885
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 APS_kinase AAA_33 AAA_31 YqeC AAA_24 AAA_30 Mg_chelatase 6PF2K AAA_16 AAA_17 DO-GTPase1 cobW Thymidylate_kin nSTAND3 ABC_tran KTI12 AAA_18 AAA_14 SLFN-g3_helicase PaREP1 AAA_28 TsaE ArsA_ATPase
Other DBs
NCBI-ProteinID: QEY73145
UniProt: A0A9X7N3P0
LinkDB
Position
complement(3676885..3678258)
AA seq 457 aa
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVAKIKDRAV
GTEVSKSLTPGQAFVKIVQAELVELMGAANEDLDLAAAPPAVILMAGLQGAGKTTTAGKL
ARFLKERKKKSVLLVSADVYRPAAIKQLETLANDLDVTFFPSDTSQKPVDIAEAAIREAK
LKFIDVVIVDTAGRLHIDADMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNDAL
PLTGVVLTKVDGDARGGAALSVRAITGKPIKFLGMGEKSEALDPFHPDRVASRILGMGDV
LSLIEQAEQSMDREKAEKLAKKIKKGKGFDLEDFRDQLQQMKNMGGLGSLMDKLPMLGGV
NLSQMGNAQNAAEKQFKQMEAIINSMTPAERRDPEVISGSRKRRIAMGSGTQVQDVGRLI
KQHKQMQKMMKKVTAKGGMAKMMRGMGSMFPGGMPKM
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgttcgaaaaccttacagatcgcctctcgcaaacgctgcgccacgtcaccggcaaggcc
aagctgaccgaggacaacatcaaggacacgctccgcgaagtgcggatggccctgctggaa
gccgacgtggccctgccggtggtcaaggacttcgtcgccaagatcaaggatcgcgcggtc
ggtaccgaagtttccaagagcctgaccccgggccaggccttcgtgaagatcgtccaggcc
gagctggtcgagctgatgggcgcggccaacgaggacctcgaccttgctgccgctccgccg
gcggtcatcctgatggccggcctgcagggcgcgggcaagaccaccaccgccggcaagctg
gcgcgcttccttaaagagcgcaagaagaagtccgtgctgctggtatccgccgacgtctat
cgcccggcggcgatcaagcagctggaaaccctggccaacgatctggacgtgaccttcttc
ccgtccgataccagccagaagccggtggacatcgccgaagcggcgatccgcgaagccaag
ctgaagttcatcgacgtggtgatcgtcgacaccgccggccgtctgcacatcgacgccgac
atgatggacgagatcaagcaggtccacgcggcgatcaagccggtggaaaccctgttcgtg
gtcgacgccatgaccggccaggacgccgccaacaccgccaaggccttcaatgatgcgctg
ccgctgaccggcgtggtgctgaccaaggtcgatggcgacgcccgcggcggtgccgcgctg
tccgtgcgcgccatcactggcaagccgatcaagttcctcggcatgggcgagaagagcgaa
gcgctcgatccgttccaccccgatcgcgtggcctcgcgcatccttggcatgggtgacgtg
ctcagcctgatcgagcaggccgagcagagcatggaccgcgagaaggccgagaaactcgcg
aagaagatcaagaagggcaagggcttcgacctggaagacttccgcgatcagctgcaacag
atgaagaacatgggcggcctgggcagcctcatggacaagctgccgatgctcggcggcgtc
aacctgtcgcagatgggcaacgcgcagaacgcggcggagaagcagttcaagcagatggag
gcgatcatcaactccatgactcctgccgagcgccgtgatccggaagtgatcagcggctcg
cgcaagcgccgcatcgccatgggttcgggtacccaggtgcaggacgttggtcgcctcatc
aagcagcacaaacagatgcagaagatgatgaagaaggtcaccgccaagggcggcatggcc
aagatgatgcgcggcatggggagcatgttccccggcggcatgcccaagatgtga

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