Pseudomonas denitrificans (nom. rej.): F1C79_17675
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Entry
F1C79_17675 CDS
T09478
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pden03400
]
F1C79_17675
DNA repair and recombination proteins [BR:
pden03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1C79_17675
Archaeal homologous recombinant proteins
F1C79_17675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
nSTAND3
AAA_15
AAA
AAA_22
RsgA_GTPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QEY73282
UniProt:
A0A9X7R5B0
LinkDB
All DBs
Position
complement(3822452..3825916)
Genome browser
AA seq
1154 aa
AA seq
DB search
MRILSLRLKNLNSLKGEWKIDFTAEPFAGNGLFAITGPTGAGKTTLLDAICLALYHRTPR
MSVLSQSGNELMTRHTADCLAEVEFEVKGQPYRAFWSQRRARDKAEGALQAPKVELVRID
RATGEGQILTDKINDKLKQTETLTGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEEL
TGTEIYGLISQRVFERTREVRGALDQLRARAEGFELLSAEQRGELEQQGRDAAGQETAWQ
AQHAALQAQRRWREDLTRAQQQVEQAGAKEAGARQALKQAQPDLQRLADSEPAARLQPLH
QAWRSTHESAEQGRAALEDNRTQQASNREAVAQALWAASQYAQQMLAVREVEHKAVSEQH
QELQARLAQHPQRAKLGELLGGWRAQFAQRSRLAQAIAGLQQQAHAADQALQAATEQRQT
LQGTVAFMQQQIDTAGAQERQHQQQLDALLGGATETELRERLQQAQLHSRGLDRLEQLAQ
ARAQAAAQLARWQPELDALRQKRTERDTAIVALRERYQATKQQVADKEKLLQQEQRIHQL
EHLRAQLQPGEACPLCGSPEHPAVAAYQALDVSSTQSALEQARQQLAELESQGIALRGEL
AELDAQLQQGQRQRDEAQAALAQHQQAWQQQCEAQGIALKDDQQLSAERERHEALQAALQ
QQLKALEALRVQLQQAQQQRQRAERDHAEAAQQLALFEQQQTHERQRQEERAQQLAVQRT
DLQQQDQTLATTLGELGFSVPDDGEQWLAERTAQWQQWQQDQQRGQELAAAERDAEQAAR
AAQQIAAQWQQRWQTAGFDGRQPLVIHATPHQALVQAEEQLAAAQRQADALQGREQSLAE
RLEQEQARLAERLASWQQALAVSPFADEATYLAALLDDARRSELSELRQRLETAITEAGT
LRAAANQDVERLQAEPHGEHALEELDEQLQALATQLRELGQRQGEIRAQLQGDDNRRASQ
QSLFAEIARQEEEHDLWQRLNSLIGASDGARYRRFAQGLTLDHLVHLANRQLQRLHGRYQ
LARRSDGELELEVVDTWQGDTARDCKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLD
EGFGTLDGETLEVALDALDSLNATGKTIGVISHVEALKERIPVQLKVHKGVGMGYSQLDA
RFRFNPERSAPEKA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatcctcagcctgcgcctgaagaacctcaactcgctcaagggcgaatggaagatc
gacttcaccgccgagcccttcgccggcaacggcctgttcgccatcaccgggccgaccggg
gcgggcaagaccacgctgctcgatgccatctgccttgccctgtaccaccgcacgccgcgt
atgagcgtgctgtcgcagagcggcaacgaactgatgacccggcacaccgccgactgcctt
gccgaagtggaattcgaggtgaagggccagccttaccgggccttctggagccagcgccgc
gcccgcgacaaggccgaaggtgcattgcaggcgccaaaggtggagctggtgcgcatcgac
cgcgccaccggtgaagggcagattctcaccgacaagatcaacgacaagctcaagcagacc
gaaacgctcaccggcctcgacttcgagcgcttcaccaagtccatgctgctggcccagggc
ggtttcgccgccttcctcgaggccaacgccaaccagcgcgcggagctgctggaggagctc
accggtaccgaaatctacgggctgatttcccagcgtgtattcgagcgcactcgtgaagta
cgcggcgcgctggaccagttgcgcgcccgcgccgaaggcttcgagctgctcagcgccgaa
caacgcggcgaactggaacagcagggccgcgacgccgccgggcaggaaaccgcctggcaa
gcacagcacgcagcactccaggcacaacgccgctggcgcgaagacctgacccgcgcgcag
cagcaggtcgagcaggccggtgcgaaagaggcaggcgcgcgccaggcgctgaagcaggcg
caacccgatctgcaacgcctggcggacagcgagcccgccgcacgactgcaaccgctgcac
caggcctggcgcagcacccacgagagcgctgaacagggccgtgcggcgctggaggacaat
cgcacacagcaggcgtccaaccgtgaagcagtcgcccaggcgctgtgggcggccagccag
tacgcgcagcagatgctggctgtgcgcgaggtcgagcacaaggctgtcagcgaacaacac
caggagctgcaggcgcgtctggcgcagcatccgcagcgcgcgaaactgggagaactgctc
ggcggctggcgcgcgcaattcgcccagcgctcgcgtctggcgcaggccattgccggtctg
cagcagcaggcgcatgcagctgatcaggcactgcaggcagcgaccgagcaacgccagacg
ctgcagggcaccgtcgccttcatgcagcagcagatcgacacggccggcgcgcaggagcgt
cagcaccagcagcagctcgatgccttgctgggcggcgcaactgaaactgagctgcgtgaa
cgcctgcaacaggcgcaactgcatagccgtgggctggaccgtctggagcaactggcccag
gcccgcgcccaggctgctgcgcagctggcacgctggcagcccgaactggatgcgctgcgc
cagaaaagaaccgagcgcgacacagccatcgtcgcgctgcgcgagcgttatcaggcgacc
aaacaacaggtcgccgacaaggaaaaactcctgcagcaggagcagcgcatccaccagctg
gagcatctgcgcgcgcagttgcagcccggcgaggcctgcccgttgtgcggctcgccggag
cacccggcggtggcggcctaccaggcgctggatgtttcctccacgcagtcagcgctggag
caggcacgtcagcagctggccgagctggaaagccagggcattgccctgcggggtgaactg
gccgaactggatgcgcaactgcagcaggggcagcgtcagcgggacgaagcccaggccgcg
ttggcgcagcaccagcaggcttggcagcaacagtgtgaagcacagggcattgcgctgaag
gacgatcagcagctcagcgccgagcgtgagcgccatgaagctttgcaggctgccttgcag
cagcaactgaaggcgctggaagcgcttcgggttcagctccagcaggcgcagcagcaacgc
cagcgcgccgagcgcgatcacgccgaagccgcacagcagctggcactcttcgagcagcaa
cagacccacgaacgccagcgccaggaagagcgcgcgcagcaactcgcggttcaacgtact
gacctgcaacagcaggaccagacactggccaccacgctgggcgaactgggcttcagcgtg
ccggacgacggagagcaatggcttgccgagcgcaccgcgcaatggcagcaatggcagcag
gaccagcagcgtggccaggaactggctgcggccgagcgcgacgccgaacaggctgcccgc
gcggcgcaacagatcgccgcgcaatggcagcagcgttggcagacggctggcttcgatggg
cgccagccgctggtgatacacgcaactccacaccaggcattggtacaggccgaggagcag
ctggctgccgcccagcgtcaggccgatgccttgcaagggcgcgagcagtcgctggcggaa
cggctggagcaggagcaggcgcgccttgccgagcgcctggcgagttggcagcaggcactg
gcggtgagcccgttcgccgatgaggcgacctacctcgccgcgctgttggacgatgcccgg
cgcagcgaactcagtgaactgcgccagcgtctggaaacggccatcaccgaagccggtacc
ctgcgcgcggccgcgaatcaggacgtcgagcgcctgcaggccgagccccatggcgaacac
gcgctggaggaactcgacgagcagctgcaagcgctcgccactcagctgcgcgaactcggc
cagcgccagggcgagattcgtgcccagctgcaaggcgacgacaatcgccgcgccagccag
cagagcctgtttgcggaaatcgcccggcaggaagaggaacatgatctctggcagcgcctc
aacagtctgatcggcgcctccgacggtgcgcgctaccggcgtttcgcccagggcctgacc
ctcgaccacctggtgcacctcgccaaccgccagctgcagcgcctgcacggtcgctaccag
ctggcccgacgcagcgacggcgagctggaactggaagtggtggacacctggcagggcgac
accgcgcgtgactgcaagacgctgtcgggcggcgagagctttctggtcagcctggccttg
gcgctggcgctgtccgacctggtcagccacaagaccagcatcgattcgctgttcctcgac
gaaggcttcggcaccctcgacggcgagaccctggaggtggcgctggatgccctcgacagc
ctcaacgccacgggcaagaccatcggcgtgatcagtcacgtcgaggcgttgaaggaacgt
attccggtgcaactcaaggtacacaagggcgtcggcatgggatacagccagctcgacgca
cgcttccgtttcaaccccgagcgatccgcgccggagaaagcctga
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integrated database retrieval system
