Pseudomonas denitrificans (nom. rej.): F1C79_17680
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Entry
F1C79_17680 CDS
T09478
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pden03400
]
F1C79_17680 (sbcD)
DNA repair and recombination proteins [BR:
pden03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1C79_17680 (sbcD)
Archaeal homologous recombinant proteins
F1C79_17680 (sbcD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
QEY73283
UniProt:
A0A9X7R596
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Position
complement(3825913..3827133)
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AA seq
406 aa
AA seq
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MRILHTSDWHLGQHFMGKSREAEHQAFCAWLVEQVREQAVDAVIIAGDVFDTGAPPSYAR
EQYNRFIVELRDTGARLVVLGGNHDSVAMLEESRDLLACLDTQVIAAVGTDLDRQLLVLP
QRDGQPGAILCAIPFIRPRDVLTSQAGQSAQDKQLALQQAIQTHYRELFERAEAQREQLG
RHLPIIATGHLTTVGASASESVREIYVGTLEAFPTSAFPAADYIALGHIHRPQKVGGLEH
IRYCGSPIALSFDEATQGKEVLLVNLDDSGLQSVTALPVPRFQPLKSVSGSLAELLAELA
RVAREGSAEQPVWLEVMVHTDDYLTDIQLRVEKLCEELPVIVLRTRRERGTTQAALFSEA
RETLDELSPEDVFRQRLDAEDLEAPLRERLTGLYRQVVADLQEEHP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctccacacctccgactggcacctgggccagcatttcatgggcaagagccgc
gaggccgagcaccaggcgttctgcgcctggctggtcgaacaggtgcgcgagcaggccgtg
gacgcggtaatcatcgctggcgacgtgttcgataccggcgcgccgcccagctatgcccgt
gagcagtacaaccgcttcatcgtcgagctgcgcgataccggcgcgcgtctggtggtgctg
ggtggcaaccacgactcggtggcgatgctggaggagtcccgcgacctgctggcctgcctg
gatacccaggtgattgccgccgtcggcaccgacctcgatcgccagttgctggtgctgccg
caacgtgacggccagcccggcgccatcctctgcgcgattcccttcatccgtccgcgcgac
gtgctcaccagccaggccgggcagagcgcgcaggacaagcaactggccctgcagcaggcg
atccagacgcattaccgcgagctgttcgagcgcgccgaggcgcagcgcgaacagcttggc
cggcacctgccgatcatcgccaccggccacctcaccaccgttggcgccagcgccagcgag
tcggtgcgggaaatctacgtcggcaccctggaggctttccccaccagcgccttcccggcg
gcggactacatcgctctcggccatatccaccggccgcagaaggtcggcggcctggagcac
atccgctattgcggctcgcccatcgcgctgagcttcgacgaggcgacccagggcaaggaa
gtgctgctggtgaacctggatgacagcggcctgcaaagcgtcaccgcactgccggtgccg
cgcttccagcctctgaagtcggtgtccggcagccttgccgagctgctcgccgaactggcc
cgcgtcgcccgcgaaggcagcgcggagcagccggtctggctggaagtcatggtgcacacc
gacgactacctgaccgacatccagctgcgcgtcgagaagctctgcgaggagctgccggtg
atcgtcctgcgcacccgtcgcgagcgcggcaccacgcaggcggcgctgttcagcgaagcc
agggaaaccctcgacgaactcagccccgaagacgtgtttcgccagcgcctggacgccgag
gacctggaggcgccgctgcgcgagcgactgaccgggctgtaccgacaggtcgtggccgat
ctgcaggaggagcatccgtga
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