Pseudomonas denitrificans (nom. rej.): F1C79_19635
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Entry
F1C79_19635 CDS
T09478
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pden03016
]
F1C79_19635 (truB)
Enzymes [BR:
pden01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F1C79_19635 (truB)
Transfer RNA biogenesis [BR:
pden03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F1C79_19635 (truB)
Prokaryotic type
F1C79_19635 (truB)
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
HSM3_C
Motif
Other DBs
NCBI-ProteinID:
QEY73633
UniProt:
A0A9X7N1X9
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All DBs
Position
complement(4244432..4245346)
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AA seq
304 aa
AA seq
DB search
MAQVKRIRRAVNGVLILDKPLGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKAYETIAKLGVTTTTADAEGEVVEQREVTAGREAIEALLPRFRGDIE
QVPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLEMLAFESPCATLAVSCSKGTYI
RTLVEDLGRELGCGAHVAALRRTQAGPFQLNQSVTLEELEKVHAEGGNEALDRFLLPVDA
GLEHWPLLQLSEHSAYYWLHGQPVRAPDMPKFGMLRVQDHEGRFIGIGEVVEDGRLAPRR
LIRS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtgaaacgcattcgccgtgcggtcaacggtgtgctgattctcgacaagccg
ctgggcatgagctccaaccaggcgctgcagaaggtgcgctggctgctcaatgccgagaag
gccgggcacaccggcagcctcgatccgctggccaccggcgtgctgccgctgtgtttcggc
gaggcgaccaagttctcccagtacctgctcgacgccgacaaggcctacgagacgattgcc
aagctcggcgtcactaccaccaccgccgatgctgagggtgaggtggtcgagcagcgcgaa
gtgaccgctggtcgggaagccatcgaggccttgctgccacgcttccgtggcgacatagag
caggtgccgccgatgtactcggcgctgaagaaggacggccagccgttgtacaagctggcc
cgtgccggagaggtagtggagcgcgaggcgcgttctgttactattgcgcgcctggaaatg
ctcgcgttcgagtcgccctgtgcgaccctggcggtttcctgcagcaagggcacctacatt
cgcaccctggtcgaagacctcggccgcgaacttggttgtggcgcacacgtcgccgctctg
cgccggacacaggcaggtccgttccagctgaaccagtcggtgacgctggaggagctcgag
aaagtccatgccgagggtggcaacgaagccctcgaccgcttcctgctgccggtggatgcc
ggcctggaacactggccgctgctgcagttgtcggagcacagcgcctattactggctgcat
ggtcagccggtacgcgcccccgatatgccgaagttcggcatgctgcgggtgcaggatcat
gaaggccgcttcatcggtatcggtgaagtggtcgaagacgggcgcctggcgccgcgtcga
ctgattcggtcttaa
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