Pseudomonas denitrificans (nom. rej.): F1C79_19985
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Entry
F1C79_19985 CDS
T09478
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pden03400
]
F1C79_19985 (radA)
DNA repair and recombination proteins [BR:
pden03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F1C79_19985 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
RecA
AAA
GvpD_P-loop
SLFN-g3_helicase
Rad51
AAA_24
nSTAND3
AAA_14
NTPase_1
MCM
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QEY73693
UniProt:
A0A9X7N237
LinkDB
All DBs
Position
complement(4320674..4322053)
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AA seq
459 aa
AA seq
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MAKAKRMYGCTECGATYPKWAGQCPDCGAWNTLVETVIDTTPTGGSASSSSGRGGWAGQQ
ANIKTLAEVSVEEMPRFSTASAELDRALGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIA
TRLPALYVTGEESQQQVAMRARRLGLPEDKLKVMTETCIETIIATARQEQPKVMVIDSIQ
TIFTEQLQSAPGGVAQVRESAALLVRFAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTV
LYFEGESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQESVPGSVV
MATWEGSRPMLVEVQALVDTSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTYDQDVFL
NVVGGVKVLETASDLALMAAVMSSLRNRPLDHQLLVFGEVGLSGEVRPVPSGQERLKEAA
KHGFKRAIVPKGNAPKESPPGLQVIAVTRLEQALDALFE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggcgccacctacccgaaatgg
gccggtcaatgccctgattgcggcgcctggaacacgctggtcgaaaccgtcatcgacacc
acccccaccggcggctcggccagcagctcctccggccgtggcggctgggccggccagcag
gccaacatcaagaccctcgccgaagtcagcgtcgaggaaatgccgcgcttctccaccgcc
tcggcggagctggaccgcgccctgggcggcggcctggtcgacggctcggtggtgctgatc
ggcggcgaccccggcatcggcaagtccaccatcctcctgcagaccctctgcaacatcgcg
acgcgcctgccggcgctctatgtcacgggtgaggaatcccagcagcaggtcgccatgcgc
gcccgccgcctgggcctgcccgaggacaagctcaaggtcatgaccgagacctgtatcgag
accatcatcgccacggcgcgccaggagcagcccaaggtaatggtgatcgactcgatccag
accatcttcaccgaacagctgcaatccgcacccggcggcgtcgctcaggtgcgcgagagt
gcggcgctgctggtgcgtttcgccaagcagagcggcacggcgatcttcctggtcggccac
gtcaccaaggaaggctccctggccggcccgcgtgtgctggagcacatggtcgacaccgtg
ctgtatttcgagggtgaatccgacggccgcctgcgcctgctgcgggcggtgaagaaccgc
ttcggcgcggtgaacgagctgggcgtgttcgccatgaccgaccgtggtctgaaggaggtt
tccaacccgtcggccatcttcctcacccgcgcccaggaatcggtgccgggcagtgtggtc
atggccacctgggaaggctcgcggccgatgctggtggaggtgcaggcgctggtggacacc
agtcacctggccaacccgcgccgcgtgaccctgggcctggaccagaaccgcctggccatg
ctgctggcggtgctgcaccgccacggcggcatcccgacctacgaccaggatgtgttcctc
aacgtggtcggcggtgtgaaggttctggagacggcgtcggacctggcgctgatggcggcg
gtgatgtccagtctgcgcaaccgcccgctggatcaccagttgctggtgttcggcgaggtc
ggcctgtccggcgaggtgcggccggtgcccagcggccaggaacgtctgaaggaagcggcc
aagcacggcttcaaacgcgccatcgtgcccaagggcaatgcgccgaaggagtcgccgccc
ggcctgcaggtgatcgccgtgacgcgcctggagcaggcgctggatgcgttgttcgaatag
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