Pseudomonas denitrificans (nom. rej.): F1C79_22360
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Entry
F1C79_22360 CDS
T09478
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00521
Streptomycin biosynthesis
pden00523
Polyketide sugar unit biosynthesis
pden00525
Acarbose and validamycin biosynthesis
pden00541
Biosynthesis of various nucleotide sugars
pden01100
Metabolic pathways
pden01110
Biosynthesis of secondary metabolites
pden01250
Biosynthesis of nucleotide sugars
Module
pden_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
F1C79_22360 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F1C79_22360 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
F1C79_22360 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
F1C79_22360 (rfbB)
00525 Acarbose and validamycin biosynthesis
F1C79_22360 (rfbB)
Enzymes [BR:
pden01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
F1C79_22360 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QEY74124
UniProt:
A0A9X7R650
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Position
4827378..4828436
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AA seq
352 aa
AA seq
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MTILVTGSAGFIGANFVLDWLAVQDEPVVSLDKLTYAGNRQNLSSLEDDSRHIFVQGDIG
DPDLVSRLLQEHRPRAVLNFAAESHVDRSIHGPEDFIQTNIVGTFRLLESVRSYWNGLQE
SEKRDFRFLHVSTDEVYGSLSPTDPAFTENNKYEPNSPYSASKAASDHLVRAYHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLVIHNALEGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLE
AGALGETYNVGGWNEKANIDVVHTLCDMLDQEQPRADGKSYREQITFVTDRPGHDRRYAI
DATRLERELGWRPAETFDTGIRKTVRWYLDNQQWVNNVTSGTYREWVGKQYA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccattctcgtgaccggaagcgcaggtttcatcggcgccaacttcgtcctcgactgg
ctggcagttcaggatgaacccgtggtcagcctcgacaagctgacttatgcaggcaatcgc
caaaacctttccagcctggaggatgactcgcggcacatcttcgtccagggcgacatcgga
gacccggacctggtgtctcgcctgttgcaggaacatcgtccgcgcgccgtcctcaacttc
gccgcggagtcacatgtggatcgctcgatccacggcccggaagacttcatccagaccaac
atagtcggcaccttccgcctgctggaaagcgtacgctcctactggaacggcttgcaggaa
tccgagaagcgcgacttccgcttcctgcatgtatccacggacgaggtgtacggctccctg
tcaccgaccgatccagccttcaccgagaataacaagtacgagcccaacagcccgtactcg
gcatccaaggccgcctccgaccatctcgtccgtgcctaccaccacacctacgggctgccg
gtgctgaccaccaactgctcgaacaactatggcccctatcacttccctgaaaaactgatc
ccgctggtgatccacaatgccctggaaggcaagcctctgccgatctatggcgatggccag
cagattcgcgactggctgtacgtaaaagaccactgcagcgccatccgccgggtccttgag
gccggcgctctgggtgagacctataacgttggtggctggaacgaaaaggccaatatcgac
gtggtgcacaccctttgcgacatgcttgaccaggaacagcctcgcgccgacggcaaaagc
taccgggaacagatcaccttcgtgacagatcgcccaggccacgaccgccgttacgccatc
gatgccacgcgcctggagcgcgagctgggctggcggccggcggaaaccttcgataccggc
attcgcaagaccgttcgttggtacctagacaaccagcagtgggtcaacaacgtcaccagc
ggcacataccgcgagtgggtaggcaaacagtacgcatga
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