KEGG   Pseudomonas denitrificans (nom. rej.): F1C79_22360
Entry
F1C79_22360       CDS       T09478                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pden  Pseudomonas denitrificans (nom. rej.)
Pathway
pden00521  Streptomycin biosynthesis
pden00523  Polyketide sugar unit biosynthesis
pden00525  Acarbose and validamycin biosynthesis
pden00541  Biosynthesis of various nucleotide sugars
pden01100  Metabolic pathways
pden01110  Biosynthesis of secondary metabolites
pden01250  Biosynthesis of nucleotide sugars
Module
pden_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:pden00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    F1C79_22360 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    F1C79_22360 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    F1C79_22360 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    F1C79_22360 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    F1C79_22360 (rfbB)
Enzymes [BR:pden01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     F1C79_22360 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 adh_short
Other DBs
NCBI-ProteinID: QEY74124
UniProt: A0A9X7R650
LinkDB
Position
4827378..4828436
AA seq 352 aa
MTILVTGSAGFIGANFVLDWLAVQDEPVVSLDKLTYAGNRQNLSSLEDDSRHIFVQGDIG
DPDLVSRLLQEHRPRAVLNFAAESHVDRSIHGPEDFIQTNIVGTFRLLESVRSYWNGLQE
SEKRDFRFLHVSTDEVYGSLSPTDPAFTENNKYEPNSPYSASKAASDHLVRAYHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLVIHNALEGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLE
AGALGETYNVGGWNEKANIDVVHTLCDMLDQEQPRADGKSYREQITFVTDRPGHDRRYAI
DATRLERELGWRPAETFDTGIRKTVRWYLDNQQWVNNVTSGTYREWVGKQYA
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaccattctcgtgaccggaagcgcaggtttcatcggcgccaacttcgtcctcgactgg
ctggcagttcaggatgaacccgtggtcagcctcgacaagctgacttatgcaggcaatcgc
caaaacctttccagcctggaggatgactcgcggcacatcttcgtccagggcgacatcgga
gacccggacctggtgtctcgcctgttgcaggaacatcgtccgcgcgccgtcctcaacttc
gccgcggagtcacatgtggatcgctcgatccacggcccggaagacttcatccagaccaac
atagtcggcaccttccgcctgctggaaagcgtacgctcctactggaacggcttgcaggaa
tccgagaagcgcgacttccgcttcctgcatgtatccacggacgaggtgtacggctccctg
tcaccgaccgatccagccttcaccgagaataacaagtacgagcccaacagcccgtactcg
gcatccaaggccgcctccgaccatctcgtccgtgcctaccaccacacctacgggctgccg
gtgctgaccaccaactgctcgaacaactatggcccctatcacttccctgaaaaactgatc
ccgctggtgatccacaatgccctggaaggcaagcctctgccgatctatggcgatggccag
cagattcgcgactggctgtacgtaaaagaccactgcagcgccatccgccgggtccttgag
gccggcgctctgggtgagacctataacgttggtggctggaacgaaaaggccaatatcgac
gtggtgcacaccctttgcgacatgcttgaccaggaacagcctcgcgccgacggcaaaagc
taccgggaacagatcaccttcgtgacagatcgcccaggccacgaccgccgttacgccatc
gatgccacgcgcctggagcgcgagctgggctggcggccggcggaaaccttcgataccggc
attcgcaagaccgttcgttggtacctagacaaccagcagtgggtcaacaacgtcaccagc
ggcacataccgcgagtgggtaggcaaacagtacgcatga

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