Pseudomonas denitrificans (nom. rej.): F1C79_22670
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Entry
F1C79_22670 CDS
T09478
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1C79_22670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pden03019
]
F1C79_22670
Messenger RNA biogenesis [BR:
pden03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F1C79_22670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
QEY74183
UniProt:
A0A9X7R652
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All DBs
Position
complement(4903045..4903524)
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AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILCNDVGQVLWARRINQEAWQFPQGGINARETPEEALYRELNEEVGL
EEQDVKILACTRGWLRYRLPQRLVRTNSQPLCIGQKQKWFLLRLTGEESRVRMDVTGKPE
FDGWKWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatcccgatggttttcgccccaatgtcggcatcatcctttgcaacgatgtcgga
caggtactgtgggcacggcgtatcaaccaggaagcctggcaatttccccagggtggcatc
aacgcccgagaaacccctgaggaagcgctgtaccgcgaactgaacgaagaagtcggcctg
gaagagcaggacgtcaagatccttgcctgtacccggggctggctgcgttaccgcctgccg
caacgcctggtgcgcaccaacagccagccgctgtgcatcgggcagaaacagaagtggttc
cttctgcgcctgaccggcgaggaaagccgggtgcgcatggatgtcaccggcaaacccgaa
ttcgacggctggaaatgggtgagctactggtacccgctgggccaggtcgtgaccttcaag
cgcgaggtctaccgccgggctctgaaggaattggcaccgcgcctgctggcgcgcgactag
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